Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4405806	4405909	104	35 [0]	[0] 75	hflX	predicted GTPase

GCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAGG  >  W3110S.gb/4405737‑4405805                                                                     | gCTGCGCCATCTGTCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:564285/1‑69 (MQ=255) gCTGCGCCATCTGGCTGCGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1315115/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGCCCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:397951/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGCCCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1194647/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACGTTGAAAGACAGAAAGGCGGGATAgg  >  1:1553789/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:586309/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:369053/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:386973/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:420439/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:460041/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:530800/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1551908/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:595327/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:632355/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:635014/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:80657/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:826169/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:830056/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:837906/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:274759/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1049789/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1528885/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1502478/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1470105/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1467800/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1427006/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1372136/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1264740/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1214487/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1200519/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1185345/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1158355/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1128009/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1104829/1‑69 (MQ=255) gCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAgg  >  1:1059563/1‑69 (MQ=255)                                                                     | GCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAGG  >  W3110S.gb/4405737‑4405805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑