Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4405806	4405909	104	35 [0]	[0] 75	hflX	predicted GTPase

AGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGCC  >  W3110S.gb/4405910‑4405977 |                                                                    aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTa                               >  1:456356/1‑39 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:453324/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:587026/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:585137/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:557118/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:520918/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:509681/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:490569/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:489210/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:483275/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:595905/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:448439/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:441343/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:439486/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:437226/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:431476/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:410004/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:403578/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1048737/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:791791/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:972954/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:958238/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:92781/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:926128/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:878236/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:843791/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:84000/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:817506/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:400278/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:758694/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:737019/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:729572/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:71937/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:70204/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:629442/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:621452/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:603441/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1183437/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:37436/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1448167/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1387010/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:135801/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1340213/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1278065/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1203791/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1190230/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1482001/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1172777/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1171253/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1165560/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1113696/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1104146/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1089389/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1086137/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1083146/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:277104/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:372202/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:360685/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:356178/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:339426/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:33499/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:300603/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:295327/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:287092/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:270862/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:240185/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:22170/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:19564/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1598830/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1557984/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1524220/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:1511898/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGc   >  1:139544/1‑67 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGAGGGATATACCAACGcc  >  1:588219/1‑68 (MQ=255) aGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCATACTGTTTCGCTGGTGGGATATACCAACGcc  >  1:940518/1‑68 (MQ=255) |                                                                    AGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGCC  >  W3110S.gb/4405910‑4405977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑