Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 296095 296317 223 108 [0] [0] 13 intF predicted phage integrase

Only 100 of 108 total aligned reads displayed.

CTCTCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCATATA  >  W3110S.gb/296026‑296094
                                                                    |
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGTCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:354392/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:333108/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:638135/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:578934/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:563568/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:542756/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:517696/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:508239/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:469701/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:436027/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:380061/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:647402/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:327415/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:288597/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:286259/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:271632/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:262134/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:223965/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:189549/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:167600/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1597232/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1594008/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:844579/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:967755/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:961515/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:956080/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:932357/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:93187/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:92806/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:868946/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:867146/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:850226/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:848335/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1051080/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:838191/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:811256/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:742988/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:733610/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:728800/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:723655/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:720200/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:718451/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:69932/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:679703/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1181428/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1310343/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1578945/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:128408/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1251188/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1237495/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1233821/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:122681/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:12268/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1222980/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1202893/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1287218/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1166500/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1150376/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1138326/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1128459/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1108661/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1081933/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1067237/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1055803/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1051629/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1024735/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1563933/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1499516/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1497634/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1494902/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1526355/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1321085/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1538910/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1421810/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1368562/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1353402/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1548362/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1558340/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1334666/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:1355706/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:474068/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:1371071/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:501893/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:174000/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:782727/69‑1 (MQ=255)
ctctCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:565273/69‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:886224/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1562091/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1186253/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1428039/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:718768/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1351409/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1295359/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:562870/68‑1 (MQ=255)
 tctcGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:1151697/68‑1 (MQ=255)
          atcaATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTACCCGCAtata  <  1:601242/59‑1 (MQ=255)
                    cAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:800810/49‑1 (MQ=255)
                           tAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCTCAtata  <  1:208497/42‑1 (MQ=255)
                           tAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:1130128/42‑1 (MQ=255)
                           tAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCAtata  <  1:699167/42‑1 (MQ=255)
                                                                    |
CTCTCGCATCATCAATCTTCCAGTCGTTAATGTTGCCAATAGTCATGCGAAGGGTTTTCCCCGCATATA  >  W3110S.gb/296026‑296094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑