Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1137057	1137883	827	189 [0]	[0] 57	[flgG]–[flgI]	[flgG],flgH,[flgI]

CTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCAAAA  >  W3110S.gb/1137884‑1137951 |                                                                    cTGGTCGCGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:206420/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAgtgt                    >  1:1263656/1‑50 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAgtgt                    >  1:1107206/1‑50 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAg                       >  1:1305540/1‑47 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAggggg            >  1:643567/1‑58 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGTGTAAGGCaaaa  >  1:1321726/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaac  >  1:1000637/1‑67 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:490438/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:593861/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:58724/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:51562/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:610687/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:399589/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:382851/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:342640/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:33037/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:196751/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1455542/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:659196/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:675961/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:719751/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:837841/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:84578/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:867087/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:867158/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:933786/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:947705/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:955041/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:960620/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:978387/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1254197/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1017818/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:101782/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1045775/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1051855/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1053177/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1066701/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1076539/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1100267/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1115210/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1144505/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1214574/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1233486/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1235996/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1561034/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1283423/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1299309/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1339095/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1362236/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:141337/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1415419/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:142943/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1437471/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaaa  >  1:1491513/1‑68 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCaaa   >  1:455281/1‑67 (MQ=255) cTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCAACAGTGTTCAGGGGGTAAGGCaaaa  >  1:19226/1‑68 (MQ=255) cTGGTAACGACGGCGGCTCAGGCTGAGCGTATTcgc                                  >  1:1389642/1‑36 (MQ=255) |                                                                    CTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCAAAA  >  W3110S.gb/1137884‑1137951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑