New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 606711	47 (1.020)	5 (0.130) +CCCGGGTTG	3/78	NT	11.6%	intergenic (‑105/‑348)	ybdK/hokE	gamma‑glutamyl:cysteine ligase/toxic polypeptide, small
	?	W3110S.gb	3793220 =	47 (1.020)					intergenic (+108/‑30)	uhpC/uhpT	membrane protein regulates uhpT expression/hexose phosphate transporter

GTGATGGTGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/606697‑606711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACGCAGGTATTC  >  W3110S.gb/3793220‑3793233                |||||||||               tTGATGGTGAACTGACCCGGGTTGTCACGCAGGTATTC  <  1:662901/37‑1  TGATGGTGAACTGACCCGGGTTGTCACGCAGGTATT   >  1:317272/1‑36  TGATGGTGAACTGACCCGGGTTGTCACGCAGGTAT    <  1:2000975/35‑1  TGATGGTGAACTGACCCGGGTTGTCACGCAGGTAT    >  1:2335091/1‑35   GATGGTGAACTGACCCGGGTTGTCACGCAGGTATT   >  1:556457/1‑35                |||||||||               GTGATGGTGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/606697‑606711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACGCAGGTATTC  >  W3110S.gb/3793220‑3793233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.