| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1499899 = | 41 (0.890) | 26 (0.780) +CTTGTTACACCGT |
6/70 | NT | 42.6% | coding (1300/1626 nt) | mdoD | glucan biosynthesis protein, periplasmic |
| ? | W3110S.gb | 3737712 = | 55 (1.200) | coding (423/723 nt) | yieK | predicted 6‑phosphogluconolactonase | |||||
TCGGGATAGTGTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1499915‑1499899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCCATGAGCAAACC > W3110S.gb/3737712‑3737727 ||||||||||||| atGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAAC > 1:2090480/3‑45atGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAA > 1:2754964/3‑44atGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAG > 1:431552/3‑40 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:3725041/40‑1 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGA > 1:1192440/2‑38 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGA > 1:1733143/2‑38 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCATG < 1:3844505/36‑1 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCAT < 1:2189457/35‑1 tGGGATAGTGTTCACCCTTGTTACACCGTTTTCCA > 1:3329270/2‑35 GGGATAGTGTTCACCCTTGTTACACGGTTTTCCATGAGCA < 1:911709/40‑1 GGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGA > 1:2745402/1‑37 GGGATAGTGTTCACCCTTGTTACACCGTTTTCCATGA > 1:1879685/1‑37 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAA > 1:622138/1‑41 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAA > 1:3366628/1‑41 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAA < 1:469775/41‑1 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:908281/39‑1 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAGC > 1:2256620/1‑38 GGATAGTGTTCACCCTTGTTACACCGTTTTCCATGAG > 1:4186934/1‑37 GGATAGTGTTCACCCTTGTTACACAGTTTTCCATG > 1:932234/1‑35 TAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:3664710/36‑1 TAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:2321513/36‑1 TAGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:228750/36‑1 AGTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAA > 1:910767/1‑37 AGTGTTCACCCTTGTTACACCGTTTTCCATGAGCA < 1:1244963/35‑1 GTGTTCACCCTTGTTACACCGTTTTCCATGAGCAAAC > 1:2632596/1‑37 TTCACCCTTGTTACACCGTTTTCCATGAGCAAACt > 1:880421/1‑34 ||||||||||||| TCGGGATAGTGTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/1499915‑1499899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCCATGAGCAAACC > W3110S.gb/3737712‑3737727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |