New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb 2564137 =4 (0.090)11 (0.270)
+ATGCG
9/86 NT 42.7% coding (1404/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase
?W3110S.gb 4011453 = 29 (0.630)coding (575/2736 nt) rbbA fused ribosome‑associated ATPases

GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/2564202‑2564137
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTATTCGCCAGCGGC  >  W3110S.gb/4011453‑4011467
                                                                  |||||               
GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG                 >  1:1410882/1‑71
    CGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT             <  1:833473/71‑1
    CGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT             <  1:2401327/71‑1
    CGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA              <  1:4552219/70‑1
     GCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATT            >  1:3090077/1‑71
     GCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT             <  1:3522419/70‑1
          TTTTTGGCGTATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC         <  1:1716608/69‑1
          TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC         <  1:1421948/69‑1
          TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC         >  1:3321027/1‑69
          TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATT            >  1:1441885/1‑66
            TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCC        <  1:2424230/68‑1
             TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC     <  1:3048061/70‑1
                  GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA                     >  1:558817/1‑49
                    ATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATG                   <  1:1841594/49‑1
                     TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG                <  1:1324575/51‑1
                     TCGGTTGTGCCGGTGACGGTGAAATAACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGt  >  1:1717836/1‑64
                        GTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA                     >  1:657385/1‑43
                             GCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA                     >  1:1238824/1‑38
                                 GTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA              >  1:66303/1‑41
                                  TGACGGTGAAATCACTCGCATTTCCTTCCTTAATGCGGTATTC           <  1:3704108/43‑1
                                    ACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG                <  1:2239078/36‑1
                                    ACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG                <  1:926707/36‑1
                                         GAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG   >  1:3049203/1‑44
                                         GAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG   >  1:4602304/1‑44
                                          AAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAG      <  1:2528297/40‑1
                                          AAATCACTAGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG   >  1:1344371/1‑43
                                                                  |||||               
GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/2564202‑2564137
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTATTCGCCAGCGGC  >  W3110S.gb/4011453‑4011467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.