| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 4 (0.090) | 11 (0.270) +ATGCG |
9/86 | NT | 42.7% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | 4011453 = | 29 (0.630) | coding (575/2736 nt) | rbbA | fused ribosome‑associated ATPases | |||||
ATCCTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTC > W3110S.gb/4011386‑4011523 | cgcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTa < 1:4552219‑M2/3‑1 (MQ=255)cgcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTAt < 1:833473‑M2/4‑1 (MQ=255)cgcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTAt < 1:2401327‑M2/4‑1 (MQ=255) gcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTAtt > 1:3090077‑M2/67‑71 (MQ=255) gcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTAt < 1:3522419‑M2/4‑1 (MQ=255) cTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTc < 1:2498727/70‑1 (MQ=255) cTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTc < 1:4600082/70‑1 (MQ=255) cTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCg < 1:429759/71‑1 (MQ=255) tttttggcgtatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTATTCGc < 1:1716608‑M2/8‑1 (MQ=255) tttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTAtt > 1:1441885‑M2/62‑66 (MQ=255) tttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTATTCGc < 1:1421948‑M2/8‑1 (MQ=255) tttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTATTCGc > 1:3321027‑M2/62‑69 (MQ=255) tttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTATTCGcc < 1:2424230‑M2/9‑1 (MQ=255) ttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgGTATTCGCCAGc < 1:3048061‑M2/12‑1 (MQ=255) acaacGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTa > 1:3235878/1‑55 (MQ=255) tcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatgcgg < 1:1324575‑M2/1‑1 (MQ=255) tcggttgtgccggtgacggtgaaataactcgcatttccttcctgaatgcgGTATTCGCCAGcggt > 1:1717836‑M2/51‑64 (MQ=255) acGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCaa < 1:1561846/71‑1 (MQ=255) cGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAat < 1:4201974/71‑1 (MQ=255) gggggTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGc < 1:1296708/62‑1 (MQ=255) tGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTAtt > 1:2007698/1‑46 (MQ=255) tGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGc > 1:3853844/1‑53 (MQ=255) gACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGcc > 1:3627793/1‑49 (MQ=255) gACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCg < 1:4063633/70‑1 (MQ=255) gACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGt > 1:3711059/1‑71 (MQ=255) gtgacggtgaaatcactcgcatttccttcctgaatgcgGTa > 1:66303‑M2/39‑41 (MQ=255) tgacggtgaaatcactcgcatttccttccttaatgcgGTATTc < 1:3704108‑M2/6‑1 (MQ=255) cGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTg < 1:2328766/71‑1 (MQ=255) acggtgaaatcactcgcatttccttcctgaatgcgg < 1:926707‑M2/1‑1 (MQ=255) acggtgaaatcactcgcatttccttcctgaatgcgg < 1:2239078‑M2/1‑1 (MQ=255) ctcCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCa < 1:1338747/48‑1 (MQ=255) ctcCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAatat > 1:2549534/1‑57 (MQ=255) tcCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTTCTGGTc < 1:2997650/69‑1 (MQ=255) gaaatcactcgcatttccttcctgaatgcgGTATTCGCCAGCgg > 1:3049203‑M2/31‑44 (MQ=255) gaaatcactcgcatttccttcctgaatgcgGTATTCGCCAGCgg > 1:4602304‑M2/31‑44 (MQ=255) ccGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCa > 1:1810260/1‑71 (MQ=255) aaatcactcgcatttccttcctgaatgcgGTATTCGCCAg < 1:2528297‑M2/11‑1 (MQ=255) aaatcactagcatttccttcctgaatgcgGTATTCGCCAGCgg > 1:1344371‑M2/30‑43 (MQ=255) gCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCAcc > 1:3269799/1‑71 (MQ=255) gCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCAcc < 1:477455/71‑1 (MQ=255) cccAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAata > 1:3600462/1‑48 (MQ=255) gTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCa < 1:4398505/36‑1 (MQ=255) ttCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGt < 1:307344/50‑1 (MQ=255) ttCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCATGCTGGTCGCCACCGCCtat < 1:4528261/69‑1 (MQ=255) cTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAg > 1:4631632/1‑45 (MQ=255) cTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCAc > 1:4459864/1‑60 (MQ=255) cTGGGATCTGATCGACAGTATTAGCCAGCGGCAGAGCAATATGa > 1:2002721/1‑44 (MQ=255) ggATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTatat > 1:2425090/1‑66 (MQ=255) ggATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGaa < 1:278503/70‑1 (MQ=255) gATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGc < 1:3593974/41‑1 (MQ=255) aTCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTatat > 1:49938/1‑59 (MQ=255) aTCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCg < 1:2444182/70‑1 (MQ=255) cGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAAc > 1:2525073/1‑71 (MQ=255) gTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTc < 1:775725/71‑1 (MQ=255) gTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTc < 1:1233171/71‑1 (MQ=255) | ATCCTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTC > W3110S.gb/4011386‑4011523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |