New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | 2691202 = | 49 (1.070) | 12 (0.310) +GTCAGTTC |
5/80 | NT | 19.9% | coding (2998/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase |
? | W3110S.gb | 2980369 = | 67 (1.460) | coding (470/1419 nt) | araE | arabinose transporter |
CCTGCGTGACAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2691218‑2691202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCATCAACTGGTACA > W3110S.gb/2980369‑2980384 |||||||| CCTGCGTGACAACCCGGGTCAGTTCACCATCAACTGGTA > 1:1623462/1‑39 CCTGCGTGACAACCCGGGTCAGTTCACCATCAACTGGTA > 1:2611623/1‑39 CCTGCGTGACAACCCGGGTCAGTTCACCATCAACTGGTA > 1:3345287/1‑39 CCTGCGTGACAACCCGGGTCAGTTCACCATCAACTGG > 1:212899/1‑37 CCTGCGTGACAACCCGGGTCAGTTCACCATCAACT > 1:4320239/1‑35 CCTGAGTGACAACCCGGGTCAGTTCACCATCAACTGG > 1:3680117/1‑37 TGCGTGACAACCCGGGTCAGTTCACCATCAACTGGTACt < 1:2385364/39‑2 TGCGTGACAACCCGGGTCAGTTCACCATCAACTGG < 1:133307/35‑1 GCGTGACAACCCGGGTCAGTTCACCATCAACTGGTA > 1:1543424/1‑36 GCGTGACAACCCGGGTCAGTTCACCATCAACCGGTA > 1:1609492/1‑36 CGTGACAACCCGGGTCAGTTCACCATCAACTGGTA > 1:1235570/1‑35 GTGACAACCCGGGTCAGTTCACCATCAACTGGTAC < 1:2668815/35‑1 |||||||| CCTGCGTGACAACCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2691218‑2691202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCATCAACTGGTACA > W3110S.gb/2980369‑2980384 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |