| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2691202 = | 49 (1.070) | 12 (0.310) +GTCAGTTC |
5/80 | NT | 19.9% | coding (2998/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase |
| ? | W3110S.gb | 2980369 = | 67 (1.460) | coding (470/1419 nt) | araE | arabinose transporter | |||||
CATTGCGCGCCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGATACA > W3110S.gb/2980299‑2980435 | cATTGCGCGCCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGa > 1:1924699/1‑71 (MQ=255)cATTGCGCGCCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGa > 1:615429/1‑71 (MQ=255) aTTGCGCGCCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGAc < 1:2048732/71‑1 (MQ=255) gcgcgcCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCAt > 1:266228/1‑71 (MQ=255) cgcgcCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:2674892/71‑1 (MQ=255) gcgcCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:3627857/70‑1 (MQ=255) gcCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:1682132/68‑1 (MQ=255) gcCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCaa > 1:4497488/1‑70 (MQ=255) cAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTg > 1:2493209/1‑71 (MQ=255) tACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTa > 1:3014195/1‑70 (MQ=255) tACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTa > 1:504523/1‑70 (MQ=255) tACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTa > 1:4376889/1‑70 (MQ=255) aCCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa > 1:1625604/1‑71 (MQ=255) ccGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa > 1:2710327/1‑70 (MQ=255) ccGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa < 1:4619829/70‑1 (MQ=255) cGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:2902332/59‑1 (MQ=255) gCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGAc > 1:376321/1‑54 (MQ=255) gCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:2775690/58‑1 (MQ=255) gCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATc < 1:2262666/58‑1 (MQ=255) cTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGa > 1:2973138/1‑52 (MQ=255) cTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa < 1:1030082/67‑1 (MQ=255) ataACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATa > 1:280407/1‑67 (MQ=255) taACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCa < 1:569735/55‑1 (MQ=255) taACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTg < 1:1873015/69‑1 (MQ=255) taACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTg < 1:2471577/69‑1 (MQ=255) aCTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa > 1:2520751/1‑62 (MQ=255) aCTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGatca < 1:4116436/71‑1 (MQ=255) aCTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGatca < 1:2363268/71‑1 (MQ=255) aCTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGatc > 1:180685/1‑70 (MQ=255) cTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAAc < 1:2415994/54‑1 (MQ=255) tGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTg < 1:1312607/55‑1 (MQ=255) cGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTAc > 1:4004884/1‑71 (MQ=255) gTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTg > 1:4099306/1‑47 (MQ=255) tATCGGATAAAAACGCCCGCACGATGCCGAGTGTGAc > 1:639419/1‑37 (MQ=255) tATCGGATAAAAACGCCAGCACGATGCCGAGTGTGAc > 1:2716245/1‑37 (MQ=255) tATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACcgcg > 1:1226499/1‑70 (MQ=255) aTCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGaa > 1:1111110/1‑71 (MQ=255) tCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCaa > 1:4509265/1‑41 (MQ=255) tCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCaa > 1:4403814/1‑41 (MQ=255) tCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCa < 1:3419658/40‑1 (MQ=255) tCGGATAAAAACGCCAGCACGATGCAGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAAc > 1:622735/1‑71 (MQ=255) ggATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTAc > 1:2038667/1‑62 (MQ=255) ggATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCTAACGt > 1:1228272/1‑71 (MQ=255) ggATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGt > 1:3940844/1‑71 (MQ=255) tAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGaa < 1:1451766/65‑1 (MQ=255) tAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGtttt > 1:4585566/1‑71 (MQ=255) tAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGtttt > 1:2442042/1‑71 (MQ=255) aaaaaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGatcat > 1:3503095/1‑53 (MQ=255) aaaaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACcg > 1:532871/1‑59 (MQ=255) aaaaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTc < 1:506974/70‑1 (MQ=255) aaaaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCa > 1:803751/1‑71 (MQ=255) aaaaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCa < 1:2361954/71‑1 (MQ=255) cctgcgtgacaacccgggtcagttcACCATCAACt > 1:4320239‑M2/26‑35 (MQ=255) cctgcgtgacaacccgggtcagttcACCATCAACTgg > 1:212899‑M2/26‑37 (MQ=255) cctgcgtgacaacccgggtcagttcACCATCAACTGGTa > 1:1623462‑M2/26‑39 (MQ=255) cctgcgtgacaacccgggtcagttcACCATCAACTGGTa > 1:2611623‑M2/26‑39 (MQ=255) cctgcgtgacaacccgggtcagttcACCATCAACTGGTa > 1:3345287‑M2/26‑39 (MQ=255) cctgagtgacaacccgggtcagttcACCATCAACTgg > 1:3680117‑M2/26‑37 (MQ=255) aaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACa > 1:1966631/1‑40 (MQ=255) aaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACt > 1:79114/1‑71 (MQ=255) aaCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACt < 1:2243791/71‑1 (MQ=255) tgcgtgacaacccgggtcagttcACCATCAACTgg < 1:133307‑M2/12‑1 (MQ=255) tgcgtgacaacccgggtcagttcACCATCAACTGGTact < 1:2385364‑M2/16‑2 (MQ=255) aCGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACtt > 1:3322198/1‑71 (MQ=255) gcgtgacaacccgggtcagttcACCATCAACTGGTa > 1:1543424‑M2/23‑36 (MQ=255) gcgtgacaacccgggtcagttcACCATCAACCGGTa > 1:1609492‑M2/23‑36 (MQ=255) cgtgacaacccgggtcagttcACCATCAACTGGTa > 1:1235570‑M2/22‑35 (MQ=255) gtgacaacccgggtcagttcACCATCAACTGGTAc < 1:2668815‑M2/15‑1 (MQ=255) cAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCtt < 1:2514832/48‑1 (MQ=255) aGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTa > 1:576884/1‑48 (MQ=255) gCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACtgc < 1:159991/51‑1 (MQ=255) gCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCAtt > 1:4004145/1‑71 (MQ=255) cACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCAttt > 1:977774/1‑71 (MQ=255) aCGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCAttt > 1:3672486/1‑70 (MQ=255) gATGCCGAGTGTGACCATCAACTGGTACATACTGatc > 1:1051278/1‑37 (MQ=255) gATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAg < 1:3427944/71‑1 (MQ=255) aTGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTc < 1:4171343/56‑1 (MQ=255) gCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCAc > 1:4283687/1‑56 (MQ=255) ccGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCAc < 1:3072006/55‑1 (MQ=255) ccGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGaaa < 1:2097884/70‑1 (MQ=255) ccGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAg < 1:883422/71‑1 (MQ=255) cGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGa < 1:4117207/71‑1 (MQ=255) cGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGa < 1:1901052/71‑1 (MQ=255) gAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGAt < 1:4384168/71‑1 (MQ=255) gAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGAt < 1:2697016/71‑1 (MQ=255) gAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGAt < 1:1938482/71‑1 (MQ=255) aGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGATa < 1:1143739/71‑1 (MQ=255) gtgtGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCAc < 1:4535682/51‑1 (MQ=255) tgtgACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGATACa < 1:1793796/71‑1 (MQ=255) | CATTGCGCGCCAGTTACCGCTATAACTGAACGCTGTATCGGATAAAAACGCCAGCACGATGCCGAGTGTGACCATCAACTGGTACATACTGATCATCTTACCGCGAACGTTTTCACTTGCCATTTCAGAAAGATACA > W3110S.gb/2980299‑2980435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |