| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2703833 | 9 (0.200) | 19 (0.430) +TT |
4/92 | NT | 41.0% | coding (133/975 nt) | lepB | leader peptidase |
| ? | W3110S.gb | 3121548 = | 48 (1.040) | coding (914/2172 nt) | glcB | malate synthase G | |||||
TTTCAACGTTGCTTTATCCAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2703810‑2703833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTCTCCATTTTCT > W3110S.gb/3121548‑3121563 || taTCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT < 1:1725138/38‑1taTCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT < 1:3576562/38‑1 aTCAACGGTGGTATATCCAGTGATTTTTTTCTCCATT > 1:4402812/2‑37 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTag > 1:745773/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTag > 1:284293/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTag > 1:2926478/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTag > 1:3593813/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTag > 1:3767928/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTa > 1:235712/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTa > 1:514671/1‑38 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT < 1:2693876/38‑1 TCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTT > 1:2142266/1‑37 CAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT < 1:1758723/37‑1 CAACGGTGGTATATCCAGTGATTTTTTTCTCCATTT > 1:380552/1‑36 CAACGGTGGTATATCCAGTGATTTTTTTCTCCATTT > 1:4551515/1‑36 CAACGGTGGTATATCCAGTGATTTTTTTCTCCATTT > 1:4556899/1‑36 AACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT > 1:3218658/1‑36 AACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT > 1:2547131/1‑36 AACGGTGGTATATCCAGTGATTTTTTTCTCCATTTT > 1:2134357/1‑36 || TTTCAACGTTGCTTTATCCAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2703810‑2703833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTCTCCATTTTCT > W3110S.gb/3121548‑3121563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |