| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2703833 | 9 (0.200) | 19 (0.430) +TT |
4/92 | NT | 41.0% | coding (133/975 nt) | lepB | leader peptidase |
| ? | W3110S.gb | 3121548 = | 48 (1.040) | coding (914/2172 nt) | glcB | malate synthase G | |||||
AGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCA > W3110S.gb/2703768‑2703901 | aGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTccc > 1:2866524/1‑71 (MQ=255) tttCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAgccgcc < 1:2577520/71‑1 (MQ=255) ccagccagGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTg > 1:461772/1‑66 (MQ=255) cagccagGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGa > 1:3025732/1‑47 (MQ=255) gCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGa > 1:3376315/1‑71 (MQ=255) cAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCccgc > 1:405055/1‑71 (MQ=255) aCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGcgcc < 1:1211798/51‑1 (MQ=255) tttCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTa < 1:2213933/70‑1 (MQ=255) tatcaACGGTGGTATATCCAGTGAtttttttctccatttt < 1:1725138‑M1/38‑17 (MQ=255) tatcaACGGTGGTATATCCAGTGAtttttttctccatttt < 1:3576562‑M1/38‑17 (MQ=255) atcAACGGTGGTATATCCAGTGAtttttttctccatt > 1:4402812‑M1/2‑23 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattttag > 1:284293‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattttag > 1:745773‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattttag > 1:3767928‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattttag > 1:3593813‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattttag > 1:2926478‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccatttta > 1:514671‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccatttta > 1:235712‑M1/1‑22 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccatttt < 1:2693876‑M1/38‑17 (MQ=255) tCAACGGTGGTATATCCAGTGAtttttttctccattt > 1:2142266‑M1/1‑22 (MQ=255) cAACGGTGGTATATCCAGTGAtttttttctccatttt < 1:1758723‑M1/37‑17 (MQ=255) cAACGGTGGTATATCCAGTGAtttttttctccattt > 1:380552‑M1/1‑21 (MQ=255) cAACGGTGGTATATCCAGTGAtttttttctccattt > 1:4551515‑M1/1‑21 (MQ=255) cAACGGTGGTATATCCAGTGAtttttttctccattt > 1:4556899‑M1/1‑21 (MQ=255) aaCGGTGGTATATCCAGTGAtttttttctccatttt > 1:2134357‑M1/1‑20 (MQ=255) aaCGGTGGTATATCCAGTGAtttttttctccatttt > 1:2547131‑M1/1‑20 (MQ=255) aaCGGTGGTATATCCAGTGAtttttttctccatttt > 1:3218658‑M1/1‑20 (MQ=255) gCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGaaa > 1:3805914/1‑69 (MQ=255) tATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAAt > 1:3377794/1‑71 (MQ=255) tCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAAt < 1:3852970/69‑1 (MQ=255) aGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATc < 1:178598/71‑1 (MQ=255) tGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCa < 1:3550644/71‑1 (MQ=255) aGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGtt > 1:3721883/1‑45 (MQ=255) | AGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCA > W3110S.gb/2703768‑2703901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |