| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2107291 | 65 (1.410) | 87 (1.930) +A |
25/94 | NT | 62.4% | coding (904/993 nt) | wbbI | conserved hypothetical protein |
| ? | W3110S.gb | = 2809956 | 42 (0.910) | coding (531/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
Only 100 of 196 total aligned reads displayed.
GATCACCTCTTCAAGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCTTTGATTGATC > W3110S.gb/2107223‑2107359 | gATCACCTCTTCAAGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATtct < 1:4512759/71‑1 (MQ=255) ccTCTTCAAGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACt < 1:4474336/70‑1 (MQ=255) cAAGAACATCCCTGAAGTAACTTCCTGTTCTAATTTTCTGAGAAATAATTTTTGTATTCTCACTAAttt < 1:119907/69‑1 (MQ=255) cAAGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAAttt < 1:1324285/69‑1 (MQ=255) aaGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCt > 1:3560422/1‑71 (MQ=255) gAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTta > 1:3503513/1‑71 (MQ=255) tCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATaa < 1:722205/69‑1 (MQ=255) tCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATaa < 1:837153/69‑1 (MQ=255) tCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATaa < 1:4403328/69‑1 (MQ=255) cTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTa < 1:2256042/54‑1 (MQ=255) tGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTc > 1:2223036/1‑70 (MQ=255) gAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATtc > 1:2883592/1‑46 (MQ=255) aaGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTa < 1:1457611/51‑1 (MQ=255) aaGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTa < 1:3946089/51‑1 (MQ=255) tAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACt < 1:4135284/47‑1 (MQ=255) aCTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTc < 1:2187454/70‑1 (MQ=255) cTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTaa < 1:3896934/46‑1 (MQ=255) ttCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATg > 1:382175/1‑71 (MQ=255) tCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATg > 1:3195654/1‑70 (MQ=255) ccTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTAt > 1:2694527/1‑62 (MQ=255) ccTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATg < 1:1990534/69‑1 (MQ=255) cTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAg > 1:1653420/1‑71 (MQ=255) tGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTa < 1:3816665/40‑1 (MQ=255) ttCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTaa < 1:2512641/39‑1 (MQ=255) ttCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTca < 1:2276330/71‑1 (MQ=255) ttCGAATTTTCTGAGAAATAATTTTAGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTc > 1:2671245/1‑70 (MQ=255) aTTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAAt > 1:1072676/1‑71 (MQ=255) ttCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAAtct < 1:1423897/70‑1 (MQ=255) tGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATg < 1:4595571/54‑1 (MQ=255) gagaAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTg > 1:1747944/1‑70 (MQ=255) agaAATAATTTTTGTATTCTCACTAATTTGCTTATATGTTTCTATTGTCATGGAGTCAACAATCTCTTGc < 1:1046871/70‑1 (MQ=255) agaAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAAt > 1:1983230/1‑63 (MQ=255) agaAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAAt > 1:2392309/1‑63 (MQ=255) agaAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTg < 1:2153123/69‑1 (MQ=255) aaaTAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTg < 1:2072203/45‑1 (MQ=255) cctaatttTTGTATTattagctcatcgcttcgagaaccacaccgtc > 1:2268112‑M1/3‑15 (MQ=255) ctaattTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacggga < 1:3310411‑M1/68‑56 (MQ=255) ctaattTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcga > 1:1512327‑M1/2‑14 (MQ=255) ctaattTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccat > 1:1011624‑M1/2‑14 (MQ=255) taatTTTTGTATTattagctcatcgcttcgagaacgacaccgtcttg < 1:3556899‑M1/47‑35 (MQ=255) taatTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttcca < 1:695321‑M1/52‑40 (MQ=255) taatTTTTGTATTattagctcatcgcttcgagaac < 1:3747326‑M1/35‑23 (MQ=255) taatTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCt < 1:3677038/71‑1 (MQ=255) taatTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCt < 1:3147466/71‑1 (MQ=255) taatTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCt < 1:3091185/71‑1 (MQ=255) taatTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCt < 1:4220505/71‑1 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagag > 1:275543‑M1/1‑12 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagag > 1:169460‑M1/1‑12 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagag > 1:255258‑M1/1‑12 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagag > 1:2920012‑M1/1‑12 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccg < 1:4278811‑M1/41‑30 (MQ=255) aatTTTTGTATTattagctcatcgcttcgagaaccacaccg > 1:1010797‑M1/1‑12 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagca < 1:480748‑M1/71‑61 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagca < 1:1526422‑M1/71‑61 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacggga > 1:1588836‑M1/1‑11 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatct < 1:4491658‑M1/53‑43 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatatggtcgagacgggag < 1:2897008‑M1/67‑57 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtcttgttcc < 1:3156155‑M1/49‑39 (MQ=255) atTTTTGTATTattagctcatcgcttcgagaaccacaccgtctt < 1:1389145‑M1/44‑34 (MQ=255) atTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCtt < 1:3241453/70‑1 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa < 1:3293274‑M1/71‑62 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa < 1:3407242‑M1/71‑62 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa < 1:1223335‑M1/71‑62 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa > 1:4604924‑M1/1‑10 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagca < 1:36355‑M1/70‑61 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctg < 1:868722‑M1/53‑44 (MQ=255) tttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttcc < 1:1804667‑M1/48‑39 (MQ=255) tttttGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTcaaca < 1:2000828/53‑1 (MQ=255) tttttGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAAtct > 1:2471079/1‑57 (MQ=255) ttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaat > 1:3041667‑M1/1‑9 (MQ=255) ttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaat > 1:1269682‑M1/1‑9 (MQ=255) ttttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgaga > 1:4287897‑M1/1‑9 (MQ=255) tttGTATTattagctcatcgcttcgagcaccacaccgtcatgttccatctg > 1:3648299‑M1/1‑8 (MQ=255) tttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatt > 1:789265‑M1/1‑8 (MQ=255) tttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatt > 1:2174108‑M1/1‑8 (MQ=255) tttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggt > 1:1858032‑M1/1‑8 (MQ=255) tttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatct > 1:3425317‑M1/1‑8 (MQ=255) tttGTATTattagctcatcgcttcgagaaccacaccgtcttgttccat > 1:3453548‑M1/1‑8 (MQ=255) ttGTATTattagctcatcgcttcgagaaccacaccgtcttgttcc < 1:2288714‑M1/45‑39 (MQ=255) ttGTATTattagctcatcgcttcgagaaccacaccgtcttg > 1:4355976‑M1/1‑7 (MQ=255) ttGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCTttgatt > 1:2092609/1‑71 (MQ=255) ttGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCTttgat < 1:2019056/70‑1 (MQ=255) tGTATTattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatt < 1:631934‑M1/69‑64 (MQ=255) tattattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatttgcg < 1:4579779‑M1/71‑68 (MQ=255) tattattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacggg < 1:3378833‑M1/58‑55 (MQ=255) tattattagctcatcgcttcgagaaccacaccgtcttgt < 1:1614177‑M1/39‑36 (MQ=255) attattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacg < 1:1318466‑M1/55‑53 (MQ=255) attattagctcatcgcttcgagaaccacaccgtcttgttccatct > 1:2616048‑M1/1‑3 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatttgcgg > 1:68776‑M1/1‑2 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaatttgcgg > 1:1139868‑M1/1‑2 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaat > 1:3942033‑M1/1‑2 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcga < 1:1862893‑M1/50‑49 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttcc < 1:2855920‑M1/40‑39 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttgttcc > 1:4016032‑M1/1‑2 (MQ=255) ttattagctcatcgcttcgagaaccacaccgtcttg < 1:4328477‑M1/36‑35 (MQ=255) tattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa > 1:4064947‑M1/1‑1 (MQ=255) tattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcgagacgggagagcaa > 1:914841‑M1/1‑1 (MQ=255) tattagctcatcgcttcgagaaccacaccgtcttgttccatctggtcga < 1:1868787‑M1/49‑49 (MQ=255) tattagctcatcgcttcgagaaccacaccgtcttgttcca < 1:2760477‑M1/40‑40 (MQ=255) tattagctcatcgcttcgagaaccacaccgtcttgt > 1:1100154‑M1/1‑1 (MQ=255) | GATCACCTCTTCAAGAACATCCCTGAAGTAACTTCCTGTTCGAATTTTCTGAGAAATAATTTTTGTATTCTCACTAATTTGCTTATAAGTTTCTATTGTCATGGAGTCAACAATCTCTTGCATTTCTTTGATTGATC > W3110S.gb/2107223‑2107359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |