| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2107291 | 65 (1.410) | 87 (1.930) +A |
25/94 | NT | 62.4% | coding (904/993 nt) | wbbI | conserved hypothetical protein |
| ? | W3110S.gb | = 2809956 | 42 (0.910) | coding (531/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
Only 100 of 221 total aligned reads displayed.
TCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGC > W3110S.gb/2809886‑2810026 | tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:4500914/1‑71 (MQ=255)tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:1993584/71‑1 (MQ=255)tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:4475310/1‑71 (MQ=255)tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:1360511/71‑1 (MQ=255)tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:3150347/71‑1 (MQ=255) cACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:3447193/1‑70 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt < 1:2017114‑M2/70‑2 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:2282856‑M2/1‑69 (MQ=255) aCCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:1550573‑M2/1‑69 (MQ=255) ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:2946‑M2/1‑67 (MQ=255) cGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:4579779‑M2/71‑6 (MQ=255) gCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:2147389‑M2/70‑6 (MQ=255) aaTTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:3791469‑M2/1‑62 (MQ=255) aaTTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:789265‑M2/1‑62 (MQ=255) aaTTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaa < 1:2423088‑M2/70‑9 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa > 1:4604924‑M2/1‑60 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaat < 1:4403131‑M2/64‑5 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta > 1:4064947‑M2/1‑60 (MQ=255) ttGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:1729922‑M2/1‑60 (MQ=255) tGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:480748‑M2/71‑13 (MQ=255) tGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCg > 1:3720153/1‑71 (MQ=255) tGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCg > 1:4053387/1‑71 (MQ=255) gCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:3337024‑M2/1‑58 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:275543‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:3043773‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:169460‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:2920012‑M2/1‑57 (MQ=255) ctctCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:4564476‑M2/69‑13 (MQ=255) ctcCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaat < 1:3462675‑M2/59‑5 (MQ=255) tcCCGTCTCGACCAGATGGAACAAGACGTTGTGGTTCTCGAAGCGATGAGCTAAt > 1:1965030‑M2/1‑54 (MQ=255) cccGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:4161732‑M2/58‑6 (MQ=255) cccGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:1201025‑M2/1‑53 (MQ=255) gTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAAt > 1:1488119/1‑71 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattagg > 1:640121‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta > 1:4284111‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:112263‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta > 1:289354‑M2/1‑49 (MQ=255) tctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGt < 1:4301840/54‑1 (MQ=255) ctcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCaaa < 1:2569292/66‑1 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:1292341‑M2/58‑12 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:1862893‑M2/50‑4 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta < 1:1868787‑M2/49‑3 (MQ=255) tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGAGATGAGCTAACGCGTCATCTCGCTCAAAAATc > 1:3062057/1‑69 (MQ=255) gACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:965181/1‑45 (MQ=255) gACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:2181407/1‑45 (MQ=255) gACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattag > 1:105348‑M2/1‑45 (MQ=255) gACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATcc < 1:3010030/68‑1 (MQ=255) aCCAGATGGACCAAGTCGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:3232078‑M2/1‑44 (MQ=255) aCCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:1652398‑M2/1‑44 (MQ=255) cAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa < 1:3379513/42‑1 (MQ=255) cAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:868722‑M2/53‑12 (MQ=255) cAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:1392376‑M2/1‑42 (MQ=255) cAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:691998‑M2/1‑42 (MQ=255) cAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAt > 1:2823281‑M2/1‑42 (MQ=255) cAGATGCAACAAGACGCTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:4225537‑M2/1‑42 (MQ=255) aGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:4491658‑M2/53‑13 (MQ=255) aGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:3425317‑M2/1‑41 (MQ=255) aGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaat > 1:2616048‑M2/1‑41 (MQ=255) gATGGAACAAGACGGTGTGGTTCTGGAAGCGATGAGCTaa < 1:4099729/40‑1 (MQ=255) aTGGAACAAGACGGTGTGGTTCTCTAAGCGATGAGCTAAtaatacaaa > 1:4351787‑M2/1‑39 (MQ=255) aTGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:2540505‑M2/1‑39 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta < 1:2760477‑M2/40‑3 (MQ=255) tGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTtata > 1:3202032/1‑70 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatta < 1:3309620‑M2/51‑15 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat < 1:3156155‑M2/49‑13 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:1804667‑M2/48‑12 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa > 1:2081007‑M2/1‑37 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa > 1:3816814‑M2/1‑37 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa < 1:2855920‑M2/40‑4 (MQ=255) ggAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATaa > 1:846515/1‑70 (MQ=255) ggAACAAGACGGGGTGGTTCTCGAAGCGATGAGCTaa < 1:3972628/37‑1 (MQ=255) gAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTaa > 1:1245206/1‑36 (MQ=255) gAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaa > 1:2689235‑M2/1‑36 (MQ=255) aCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata < 1:1614177‑M2/39‑6 (MQ=255) aCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta > 1:1100154‑M2/1‑34 (MQ=255) aCAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCg > 1:2606427/1‑46 (MQ=255) cAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaata > 1:3643154‑M2/1‑33 (MQ=255) cAAGACGGTGTGGTTCTCGAAGCGATGAGCTAAta < 1:3900285‑M2/35‑3 (MQ=255) cAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAg > 1:2866243/1‑69 (MQ=255) cAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGa > 1:3618169/1‑70 (MQ=255) aaGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaattagg > 1:278742‑M2/1‑32 (MQ=255) aGACGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:1516997‑M2/1‑31 (MQ=255) aGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaa > 1:911759/1‑70 (MQ=255) aCGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaa < 1:1840305‑M2/40‑12 (MQ=255) cGGTGTGGTTCTCGAAGCGATGAGCTAAtaatacaaaaatt > 1:1010797‑M2/1‑28 (MQ=255) cGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAAt < 1:3848474/71‑1 (MQ=255) gtgtGGTTCTCGAAGCGATGAGCTAAtaatacaaa > 1:3651095‑M2/1‑26 (MQ=255) gtgtGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAAt < 1:532310/69‑1 (MQ=255) gtgGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACt > 1:3604656/1‑71 (MQ=255) tgGTTCTCGAAGCGATGAGCTAAtaatacaaaaat > 1:2256731‑M2/1‑23 (MQ=255) gTTCTCGAAGCGATGAGCTAAtaatacaaaaatta > 1:1034051‑M2/1‑21 (MQ=255) gTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATg < 1:75086/65‑1 (MQ=255) ttCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGAttt < 1:769259/49‑1 (MQ=255) tcGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGaaa < 1:3399180/56‑1 (MQ=255) cGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCa > 1:1322550/1‑71 (MQ=255) gAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCAt > 1:4108288/1‑71 (MQ=255) gCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGc < 1:2300799/71‑1 (MQ=255) gATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCaa < 1:1172257/71‑1 (MQ=255) aTGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATg < 1:3297825/53‑1 (MQ=255) aCGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGc < 1:1386741/71‑1 (MQ=255) | TCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGC > W3110S.gb/2809886‑2810026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |