| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 46 (1.190) | 20/102 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
AGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTT > W3110S.gb/315642‑315776 | aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAg > 1:1373396/1‑71 (MQ=38)aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAg > 1:3582353/1‑71 (MQ=38)aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAg > 1:3297047/1‑71 (MQ=38) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTcc > 1:671524/1‑70 (MQ=255) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt > 1:3523543/1‑71 (MQ=255) aCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCggg > 1:1655832/1‑71 (MQ=255) ttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt > 1:640705/1‑71 (MQ=255) ttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt > 1:517299/1‑71 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGt > 1:1501094/1‑58 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGt > 1:265374/1‑58 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:1393750/70‑1 (MQ=255) aaaaCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:2455684/71‑1 (MQ=255) ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTg > 1:2653348/1‑71 (MQ=255) cTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:95580/71‑1 (MQ=255) cTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:865224/71‑1 (MQ=255) cTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:123157/71‑1 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1795712/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:311826/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:2939040/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:2880226/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:3233006/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:3688371/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:2389270/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:462954/1‑70 (MQ=255) tCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:693678/1‑70 (MQ=255) cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAg > 1:3418402/1‑42 (MQ=255) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc < 1:3041011/68‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:53642/71‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:1707083/71‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:67414/71‑1 (MQ=255) cTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCAct > 1:3230586/1‑53 (MQ=255) cTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCat < 1:2495777/71‑1 (MQ=255) cTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCat < 1:3603709/71‑1 (MQ=255) cTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCat < 1:3372577/71‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg > 1:231544/1‑44 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCatat > 1:206807/1‑70 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCatat > 1:2288818/1‑70 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata > 1:2443819/1‑69 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:2356962/69‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt > 1:3161846/1‑71 (MQ=255) tgtCCATATTACGTGGGTAGGAGCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:1575930/65‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:1502936/71‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:2448134/71‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:2144183/71‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTc > 1:728538/1‑70 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTATTTTGGCATGTCAGCATATTca < 1:3293547/71‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:117400/1‑55 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:1678345/1‑55 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:3516082/1‑55 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:778556/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:72566/1‑49 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc > 1:1098395/1‑50 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc > 1:1822091/1‑50 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCAct > 1:1754285/1‑40 (MQ=255) tAGGATCATAAAGTCCTAGGGTCGTTGTCCACTCTTTTgg < 1:3213981/40‑1 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2518394/39‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:1886465/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:1444765/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:1506272/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2666069/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:3083895/37‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2285909/36‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAg > 1:70197/1‑71 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTAc > 1:1219845/1‑61 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGt > 1:223401/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:1343049/1‑71 (MQ=255) | AGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTT > W3110S.gb/315642‑315776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |