| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 4 (0.100) | 6 (0.180) +ATGCGGT |
3/88 | NT | 31.0% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 27 (0.700) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
ACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACC > W3110S.gb/2564076‑2564202 | aCATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaagaa > 1:1486097/1‑69 (MQ=255)aCATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaagaa > 1:599482/1‑69 (MQ=255)aCATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaagaa > 1:2981121/1‑69 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCaggaaga > 1:2276676/1‑50 (MQ=255) agcgccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa > 1:3179748‑M1/27‑71 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGAttt < 1:2382900‑M1/24‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:2901996‑M1/48‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc < 1:1607691‑M1/48‑1 (MQ=255) gccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc < 1:2543853‑M1/47‑1 (MQ=255) ccaccgctggcgaataccgcatTCAGGAAGGAAATGCGAGTg > 1:2966397‑M1/23‑42 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCg < 1:998584‑M1/62‑1 (MQ=255) taccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCg < 1:3568037‑M1/62‑1 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:2491903‑M1/53‑1 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAc < 1:2742683‑M1/65‑1 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAc < 1:2738280‑M1/65‑1 (MQ=255) ccgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAc < 1:889754‑M1/65‑1 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:1200498‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:2845892‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:2279260‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:2270054‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:377975‑M1/6‑71 (MQ=255) cgcatTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:624884‑M1/6‑71 (MQ=255) tTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTAcc > 1:313326‑M1/2‑67 (MQ=255) tCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAaga > 1:642051/1‑58 (MQ=255) | ACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACC > W3110S.gb/2564076‑2564202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |