| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 4 (0.100) | 6 (0.180) +ATGCGGT |
3/88 | NT | 31.0% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 27 (0.700) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
CTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > W3110S.gb/3997901‑3998037 | cTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTc < 1:265478/71‑1 (MQ=255) tGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcg > 1:2200217/1‑71 (MQ=255) tGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcg > 1:1908855/1‑71 (MQ=255) cACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgc > 1:179802/1‑70 (MQ=255) cACGCTTGCT‑GCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgcca > 1:417780/1‑71 (MQ=255) cGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgcca > 1:1356479/1‑70 (MQ=255) aaaCGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGAGGTAGt < 1:476526/71‑1 (MQ=255) cgcgTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCAc > 1:1157061/1‑71 (MQ=255) gtggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAgg > 1:1757623/1‑71 (MQ=255) aaaGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATc > 1:3166892/1‑71 (MQ=255) aaaGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATc > 1:3675465/1‑71 (MQ=255) aaaGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATc > 1:2228338/1‑71 (MQ=255) aaGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATc > 1:1221292/1‑70 (MQ=255) gcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2346978/71‑1 (MQ=255) cccGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2368667/70‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:3620877/71‑1 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGata < 1:1363259/71‑1 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGata < 1:1796968/71‑1 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGata < 1:3274542/71‑1 (MQ=255) gACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1447008/66‑1 (MQ=255) gACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:3034919/66‑1 (MQ=255) cTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCt < 1:3068405/71‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2112964/61‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1046687/61‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTa < 1:3427036/69‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:737623/1‑71 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga > 1:3179748‑M2/2‑19 (MQ=255) cgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCa < 1:2191445/71‑1 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:2901996‑M2/71‑56 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:1607691‑M2/71‑56 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 1:2543853‑M2/70‑55 (MQ=255) gcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgattt < 1:2382900‑M2/47‑32 (MQ=255) ccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtg > 1:2966397‑M2/1‑15 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:60446/71‑1 (MQ=255) cACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:3711587/70‑1 (MQ=255) aCCGCTGGCGAATGTCGCCACGCCAACCGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTa > 1:1646999/1‑71 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGc > 1:192009/1‑71 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:1283133/71‑1 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcg < 1:3568037‑M2/70‑70 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcg < 1:998584‑M2/70‑70 (MQ=255) | CTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > W3110S.gb/3997901‑3998037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |