| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 205097 = | 34 (0.880) | 29 (1.010) +TTATAACATTTTA |
8/76 | NT | 49.5% | intergenic (+8/‑29) | rnhB/dnaE | ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit |
| ? | W3110S.gb | 4139149 = | 46 (1.190) | coding (2/1023 nt) | frlB | fructoselysine‑6‑P‑deglycase | |||||
AACTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGT > W3110S.gb/4139079‑4139217 | aaCTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACa > 1:2312101/1‑71 (MQ=255)aaCTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACa > 1:2056747/1‑71 (MQ=255)aaCTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACa > 1:2489420/1‑71 (MQ=255)aaCTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACa > 1:43249/1‑71 (MQ=255)aaCTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGATTTTATCAATATCCAACa > 1:1221743/1‑71 (MQ=255) ttttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattt > 1:1697400/1‑70 (MQ=255) ttttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattt > 1:257068/1‑70 (MQ=255) ttttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACatt > 1:811939/1‑69 (MQ=255) tttCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACatttta > 1:2537182/1‑71 (MQ=255) ccACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttatt < 1:700900/70‑1 (MQ=255) ccACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttatt < 1:3192290/70‑1 (MQ=255) ttCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACattttatt < 1:2418420/66‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTtctc < 1:1542731/69‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTtctc < 1:688603/69‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTcc < 1:400502/70‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTcc < 1:718989/70‑1 (MQ=255) ccTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTcc < 1:878220/70‑1 (MQ=255) cTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAg < 1:2424260/71‑1 (MQ=255) cTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAg < 1:3242133/71‑1 (MQ=255) cTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAg < 1:631220/71‑1 (MQ=255) aCCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATaa < 1:3690493/71‑1 (MQ=255) aCCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATaa < 1:3646412/71‑1 (MQ=255) aCCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATaa < 1:1786552/71‑1 (MQ=255) ttttCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTAc > 1:756280/1‑71 (MQ=255) ttttCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTAc > 1:3218629/1‑71 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattttatt < 1:995086‑M2/8‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaattttatt < 1:3287395‑M2/8‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTtctc < 1:1861976‑M2/13‑1 (MQ=255) tcttcagattccggtttacttaatctcgacttataacattttaATTTTATTTtctc < 1:2346885‑M2/13‑1 (MQ=255) cttcagattccggtttacttaatctcgacttataacattttaATTTTATTTtctc < 1:2978632‑M2/13‑1 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttatttt > 1:1161804‑M2/42‑51 (MQ=255) ttcagattccggtttacttaatctcgacttataacattttaattttatttt > 1:235179‑M2/42‑51 (MQ=255) gattccggtttacttaatctcgacttataacattttaATTTTATTTtctc < 1:281757‑M2/13‑1 (MQ=255) gattccggtttacttaatctcgacttataacattttaATTTTATTTtctc < 1:2152982‑M2/13‑1 (MQ=255) attccggtttacttaatctcgacttataacattttaatttta < 1:2792502‑M2/6‑1 (MQ=255) aCCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGc < 1:1022838/70‑1 (MQ=255) aCCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCg < 1:3272893/71‑1 (MQ=255) aCCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCg < 1:2153344/71‑1 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTtc > 1:869668‑M2/36‑46 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:1225982‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:453443‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:1230333‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:667671‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:292302‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:2816951‑M2/36‑50 (MQ=255) ttccggtttacttaatctcgacttataacattttaATTTTATTTTCTCCa > 1:2293758‑M2/36‑50 (MQ=255) tccggtttacttaatctcgacttataacattttaattttatttt > 1:781585‑M2/35‑44 (MQ=255) cAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGtt < 1:2313271/71‑1 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTcc < 1:1909293‑M2/14‑1 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTcc < 1:2282416‑M2/14‑1 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTcc < 1:3568208‑M2/14‑1 (MQ=255) gtttacttaatctcgacttataacattttaATTTTATTTTCTcc < 1:3365400‑M2/14‑1 (MQ=255) tttacttaatctcgacttataacattttaATTTTATTTTCTCcat < 1:1200481‑M2/16‑2 (MQ=255) aGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt > 1:2206762/1‑71 (MQ=255) aGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt > 1:991164/1‑71 (MQ=255) aGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt > 1:1580166/1‑71 (MQ=255) ttacttaatctcgacttataacattttaattttat > 1:496808‑M2/29‑35 (MQ=255) ttacttaatctcgacttataacattttaattttat > 1:1604898‑M2/29‑35 (MQ=255) ttacttaatctcgacttataacattttaATTTTATTTTCTCcat < 1:96470‑M2/16‑2 (MQ=255) acttaatctcgacttataacattttaATTTTATTTtctc < 1:1425952‑M2/13‑1 (MQ=255) acttaatctcgacttataacattttaATTTTATTTtctc < 1:1639394‑M2/13‑1 (MQ=255) cACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt < 1:1070572/67‑1 (MQ=255) cACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt < 1:3380311/67‑1 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATaa < 1:2992976/43‑1 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTgg > 1:1549538/1‑67 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTgg > 1:879072/1‑67 (MQ=255) cGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTgg > 1:878999/1‑67 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACaa < 1:2892571/53‑1 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACaa < 1:1745997/53‑1 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACaa < 1:78424/53‑1 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACaa < 1:1470472/53‑1 (MQ=255) ggTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc > 1:30047/1‑70 (MQ=255) tGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATaa < 1:1095595/40‑1 (MQ=255) tGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAg > 1:3128003/1‑53 (MQ=255) tGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAg > 1:2458638/1‑53 (MQ=255) tGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAg > 1:2936965/1‑53 (MQ=255) tCCAACATTTTATTTTCTCCATATAACATTACGACAAAGCGTTGAGc > 1:48655/1‑47 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGc > 1:3146210/1‑47 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCt < 1:2660735/48‑1 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc < 1:2390456/54‑1 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc < 1:1205959/54‑1 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc < 1:3083271/54‑1 (MQ=255) tCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTggcggc < 1:3410631/54‑1 (MQ=255) cAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTgg > 1:802501/1‑48 (MQ=255) cAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGc > 1:57145/1‑71 (MQ=255) cAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGc > 1:1297081/1‑71 (MQ=255) aCATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCg > 1:2469855/1‑70 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:1217995/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:2614242/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:1131749/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:2060317/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:1253535/1‑69 (MQ=255) attttattttCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGt > 1:3205663/1‑69 (MQ=255) | AACTTTTTCCACTTCCTGAACCATATTTTCGGTGACCAGAAAGTCCACGGTGCTTTTATCAATATCCAACATTTTATTTTCTCCAGATAACATTACGACAAAGCGTTGAGCTGGCGGCTACGCTTCGCCCAGAAGGCGT > W3110S.gb/4139079‑4139217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |