| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 826008 | 54 (0.710) | 28 (0.480) +ACGGCTACATCA |
6/76 | NT | 37.1% | coding (405/1254 nt) | ychP | predicted invasin |
| ? | minE | 1727040 = | 71 (0.930) | coding (1190/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase | |||||
TTTTTATGACAACTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/825993‑826008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCACTTTTTCTTCATAAG > minE/1727040‑1727058 |||||||||||| ccTTTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:1207972/3‑43ccTTTATGACAACTTGACGGCTACATCATTCACTTTTTCT < 1:2026257/38‑1 cTTTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA < 1:906768/44‑1 cTTTATGACAACTTGACGGCTACATCATTCACTTTTT < 1:1381147/36‑1 cTTTATGACAACTTGACGGCTACATCATTCACTTTTT < 1:3951008/36‑1 TTTATTACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:4330018/39‑1 TTTATGACAACTTGACGGCTACATCATTCACTTTTa > 1:2308695/1‑35 TTTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCAc > 1:2245174/1‑41 TTTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCAc > 1:2625089/1‑41 TTTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:3174234/1‑41 TTTATGACAACTTGACGGCTACATCATTCACTTTTTC > 1:4652056/1‑37 TTTATGACAACTTGACGGCTACATCATTCACTTTTT > 1:744520/1‑36 TTTATGACAACTTGACGGCTACATCATTCACTTTTT < 1:3008993/36‑1 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:189063/1‑43 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:2809519/1‑43 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:4588002/38‑1 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:3473137/38‑1 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAAc > 1:1670294/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:4432406/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:4458694/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:673907/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:1414226/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTC > 1:1623365/1‑38 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:3835589/1‑38 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:3334064/1‑38 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:3079943/1‑38 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCA > 1:2147996/1‑38 GACAACTTGACGGCTACATCATTCACTTTTTCTTCAc < 1:2573519/37‑2 ACTTGACGGCTACATCATTCACTTTTTCTTCACAAc > 1:3573412/1‑35 |||||||||||| TTTTTATGACAACTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/825993‑826008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCACTTTTTCTTCATAAG > minE/1727040‑1727058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |