| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2901256 | 100 (1.310) | 5 (0.080) | 5/82 | NT | 5.7% | intergenic (+17/+28) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein |
| ? | minE | = 2901270 | 82 (1.310) | intergenic (+31/+14) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein | |||||
GCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2901179‑2901256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccctgttACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTCGTTT < minE/2901270‑2901202 GCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTGTCGTTAATTCCTCATTT > 1:3636697/1‑71 GCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:2601584/71‑1 GCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:3520479/71‑1 GCTACTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCC < 1:3855803/70‑1 TGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGT > 1:286019/1‑71 CTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:4369975/70‑1 CTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:3729673/70‑1 CAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGT > 1:2813378/1‑61 AACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTT < 1:2371274/54‑1 CTGAAAACGACCCTCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCC < 1:3697332/54‑1 CTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTC < 1:3572282/53‑1 CTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATT < 1:3651233/51‑1 TGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:3039103/55‑1 AAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTC < 1:1686249/50‑1 CCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:1346164/45‑1 CGCAATTCATATCACAAGAAGTATCGTTATTTCCTCATTTCCCTGTT < 1:1041400/47‑1 CGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:913079/44‑1 GCAATTCATATCACAAGAAGTATCGTTAATTCCTCATT > 1:988915/1‑38 ATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:4011262/43‑1 TTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:2158313/39‑1 TTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:2283221/39‑1 TTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCT < 1:2738102/39‑1 CATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGT > 1:1088809/1‑39 CATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGT > 1:3133764/1‑39 TATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:4602644/38‑1 ATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTGAGTGC < 1:1638088/47‑1 TCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:4689177/1‑36 TCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:2007211/1‑36 TCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:1708146/1‑36 TCACAAGAAGTATCGTTAATTCCTCAGTTCCCTGTTACCTGAGTGCAGGCA < 1:3805742/51‑1 CAAGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTGAGTGCAGGCAAC < 1:4397650/50‑1 AGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTGAGTGCAGGCAA > 1:2998176/1‑47 AGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTGAGTGCAGGCAA > 1:2417564/1‑47 ATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGC > 1:4318719/1‑71 TTCCCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGG > 1:4676161/1‑71 TTCCCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCG < 1:2455124/70‑1 TCCCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGG > 1:3401831/1‑71 CCCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGG < 1:1625656/70‑1 CCCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGA > 1:782351/1‑57 CCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTC > 1:3995052/1‑71 CCTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTC > 1:788520/1‑71 CTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTCG > 1:471654/1‑71 CTGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTC < 1:1816226/70‑1 TGTTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTCG > 1:1145622/1‑70 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTCGTTT > 1:2112641/1‑71 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGA < 1:3194327/52‑1 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGAT < 1:995196/41‑1 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGAT < 1:2047246/41‑1 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGA < 1:3352589/40‑1 TTACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAA > 1:3539779/1‑37 TACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAA > 1:3540746/1‑57 GCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2901179‑2901256‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccctgttACCTGAGTGCAGGCAACAGGGAAATGAGGAATTAACGATACTTCTTGTGATATGAATTGCGGGTCGTTT < minE/2901270‑2901202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |