| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2901256 | 100 (1.310) | 5 (0.080) | 5/82 | NT | 5.7% | intergenic (+17/+28) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein |
| ? | minE | = 2901270 | 82 (1.310) | intergenic (+31/+14) | cybC/nrdG | ECK4231:JW4195:b4236; cytochrome b562, truncated/anaerobic ribonucleotide reductase activating protein | |||||
Only 100 of 168 total aligned reads displayed.
CTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGC > minE/2901187‑2901323 | ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTg > 1:279925/1‑71 (MQ=255)ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:3729673‑M1/70‑1 (MQ=255) gagCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTg < 1:3192068/70‑1 (MQ=255) gagCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTg > 1:1341598/1‑70 (MQ=255) cTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg > 1:4461962/1‑71 (MQ=255) tGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAgg > 1:1501126/1‑71 (MQ=255) tGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg > 1:2404185/1‑70 (MQ=255) gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAgg > 1:2950965/1‑70 (MQ=255) gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAgg > 1:2944963/1‑70 (MQ=255) aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGc > 1:4072817/1‑58 (MQ=255) aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt > 1:3930995/1‑70 (MQ=255) aaaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:2630640/70‑1 (MQ=255) aaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaa > 1:2112641‑M2/1‑69 (MQ=255) cGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacag > 1:471654‑M2/1‑66 (MQ=255) gACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagg > 1:3995052‑M2/1‑65 (MQ=255) gACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagg > 1:788520‑M2/1‑65 (MQ=255) gACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacag < 1:1816226‑M2/70‑6 (MQ=255) cccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCa > 1:3389790/1‑60 (MQ=255) cccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCa > 1:2262170/1‑60 (MQ=255) ctcAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc > 1:4052032/3‑71 (MQ=255) cGCAATTCATATCACAAGAAGTATCGTTATTTCCTCATTTCCCTGTT < 1:1041400‑M1/47‑1 (MQ=255) cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTg < 1:2015927/48‑1 (MQ=255) cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaacagggaa < 1:2455124‑M2/70‑10 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGcc > 1:4513463/1‑49 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt < 1:1952926/71‑1 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt > 1:1334325/1‑71 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCAATCAGGTAACAGGGAACt > 1:2565157/1‑71 (MQ=255) gCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTGAGTGCAGGCaacagggaaat > 1:4318719‑M2/1‑60 (MQ=255) cAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACtt < 1:421903/71‑1 (MQ=255) aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACtt < 1:1908155/70‑1 (MQ=255) aTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:455909/57‑1 (MQ=255) aTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat > 1:203442/1‑71 (MQ=255) aTTCATATCACAAGAAGTATCGATAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat < 1:4103495/71‑1 (MQ=255) aTTCATATCACAAGAAGTATCCTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat < 1:129467/71‑1 (MQ=255) ttCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa > 1:3540746‑M2/1‑56 (MQ=255) ttCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc < 1:1509919/66‑1 (MQ=255) ttCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc < 1:1743414/66‑1 (MQ=255) ttCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTat < 1:2088847/70‑1 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat > 1:4538836/1‑71 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat > 1:2647422/1‑71 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat > 1:3035734/1‑71 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca < 1:1109054/70‑1 (MQ=255) cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca < 1:4695763/70‑1 (MQ=255) tatCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTc < 1:2746060/48‑1 (MQ=255) tatCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT < 1:4602644‑M1/38‑1 (MQ=255) atCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTacctgagtgc < 1:1638088‑M1/47‑11 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGc > 1:3273608/1‑38 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCa > 1:3850937/1‑47 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaa < 1:3194327‑M2/52‑3 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc > 1:2859105/1‑70 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc > 1:408444/1‑70 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:4689177‑M1/1‑36 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:1708146‑M1/1‑36 (MQ=255) tCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTT > 1:2007211‑M1/1‑36 (MQ=255) acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCaa < 1:666421/70‑1 (MQ=255) caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACt > 1:1691192/1‑42 (MQ=255) caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat < 1:1415958/71‑1 (MQ=255) caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAat < 1:1738127/71‑1 (MQ=255) agaagTATCGTTAATTCCTCATTTCCCTGTTacctgagtgcaggcaa > 1:2998176‑M1/1‑31 (MQ=255) agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga < 1:438809/71‑1 (MQ=255) agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga > 1:3563165/1‑71 (MQ=255) gaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgat > 1:3424132/1‑71 (MQ=255) aagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgatg < 1:2778048/71‑1 (MQ=255) gTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt < 1:2310972/41‑1 (MQ=255) tATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTc < 1:3616027/36‑1 (MQ=255) aTCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaa < 1:2047246‑M2/41‑3 (MQ=255) tCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAg > 1:3222280/1‑36 (MQ=255) tCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcacca > 1:3553857/1‑71 (MQ=255) gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgatg < 1:374331/64‑1 (MQ=255) gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcaccac < 1:4224201/70‑1 (MQ=255) gTTAATTCCTCATTTACCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcacc > 1:1358842/1‑68 (MQ=255) ttAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTaa > 1:3539779‑M2/1‑35 (MQ=255) ttAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt < 1:1009869/71‑1 (MQ=255) aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg < 1:4296905/70‑1 (MQ=255) aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg < 1:658417/70‑1 (MQ=255) aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGa > 1:4523000/1‑71 (MQ=255) ttCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc < 1:1783142/60‑1 (MQ=255) ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAttct > 1:1670979/1‑69 (MQ=255) cATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt > 1:3124593/1‑62 (MQ=255) cATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgc > 1:1460256/1‑71 (MQ=255) ttCCCTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgg > 1:4676161‑M1/1‑9 (MQ=255) ttCCCTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcg < 1:2455124‑M1/70‑62 (MQ=255) tCCCTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcggg > 1:3401831‑M1/1‑8 (MQ=255) cccTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcggg < 1:1625656‑M1/70‑64 (MQ=255) cccTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtga > 1:782351‑M1/1‑7 (MQ=255) cccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg > 1:1028458/1‑58 (MQ=255) ccTGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtc > 1:788520‑M1/1‑6 (MQ=255) tGTTacctgagtgcaggcaacagggaaatgaggaattaacgatacttcttgtgatatgaattgcgggtcg > 1:1145622‑M1/1‑4 (MQ=255) tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCa < 1:1833792/39‑1 (MQ=255) gTTGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttcttg < 1:4397650‑M2/50‑34 (MQ=255) gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga > 1:4423327/1‑43 (MQ=255) gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga > 1:2158280/1‑43 (MQ=255) ttacctgagtgcaggcaacagggaaatgaggaattaacgat < 1:995196‑M1/41‑40 (MQ=255) ttacctgagtgcaggcaacagggaaatgaggaattaacga < 1:3352589‑M1/40‑39 (MQ=255) ttacctgagtgcaggcaacagggaaatgaggaattaa > 1:3539779‑M1/1‑2 (MQ=255) ttGCCTGCACTCAGGTaacagggaaatgaggaattaacgatacttct > 1:2417564‑M2/1‑16 (MQ=255) ttGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt > 1:4347607/1‑55 (MQ=255) ttGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt > 1:219202/1‑55 (MQ=255) tGCCTGCACTCAGGTaacagggaactgaggaattaacgatacttcttgtga < 1:3805742‑M2/51‑37 (MQ=255) tGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc > 1:917987/1‑68 (MQ=255) | CTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGC > minE/2901187‑2901323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |