| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 779686 | 90 (1.180) | 6 (0.090) | 3/90 | NT | 7.2% | coding (1/402 nt) | ycgK | hypothetical protein |
| ? | minE | = 779714 | 73 (1.070) | intergenic (‑28/‑181) | ycgK/ycgL | hypothetical protein/conserved hypothetical protein | |||||
Only 100 of 148 total aligned reads displayed.
CCCGCAGCAAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCA > minE/779616‑779756 | cccGCAGCAAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCAT > 1:1049307‑M1/1‑71 (MQ=255) gcagcaAAGCTCTTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:2595050/71‑1 (MQ=255) gcagcaAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:2798676/71‑1 (MQ=255) gcagcaAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:3531595/71‑1 (MQ=255) gcagcaAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:2721394/71‑1 (MQ=255) gcagcaAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:4169307/71‑1 (MQ=255) caAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGt > 1:4274767/1‑71 (MQ=255) aaGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGtc > 1:2604273/1‑70 (MQ=255) aGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTa > 1:1185967/1‑66 (MQ=255) aGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTa > 1:4684462/1‑66 (MQ=255) aGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTa > 1:4398567/1‑66 (MQ=255) gCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTcc < 1:1735464/71‑1 (MQ=255) gTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCt > 1:2171868/1‑68 (MQ=255) gTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGtt < 1:3409842/71‑1 (MQ=255) gTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGt > 1:2162563/1‑70 (MQ=255) tGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTgg < 1:4039179/58‑1 (MQ=255) gAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTa > 1:2063291/1‑58 (MQ=255) gAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAg < 1:2665066/71‑1 (MQ=255) gAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAg < 1:2500638/71‑1 (MQ=255) gAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAg < 1:4367917/71‑1 (MQ=255) aGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGtct < 1:3555105/61‑1 (MQ=255) ttAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATg < 1:2009220/71‑1 (MQ=255) tAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAAt > 1:3363179/1‑69 (MQ=255) tAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGAAGTCTCCTGTTCAGAAt > 1:4027706/1‑69 (MQ=255) gTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGa < 1:2739674/62‑1 (MQ=255) gTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGa < 1:1479024/62‑1 (MQ=255) tGCAAGCAGCAATACAGCCTTCCTCATGCTCTTGATTTTCATcgtactcat < 1:3765222‑M1/51‑10 (MQ=255) cAAGCAGGAATACAGCCTTCCTGATGCTCTTGATTTTCATTg > 1:35784/1‑42 (MQ=255) cAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATcgtactcattc > 1:2244019‑M1/1‑40 (MQ=255) cAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATcgtactcattc > 1:560751‑M1/1‑40 (MQ=255) cAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatg > 1:3068059‑M2/1‑68 (MQ=255) cAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGat < 1:4453238‑M2/70‑3 (MQ=255) cAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGa < 1:2633985‑M2/69‑2 (MQ=255) aaGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatga > 1:2103247‑M2/1‑67 (MQ=255) gcagcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGt < 1:3390734/41‑1 (MQ=255) gcagcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTAc < 1:771512/64‑1 (MQ=255) gcagcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTAc < 1:4649541/64‑1 (MQ=255) agcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTg < 1:1995184/71‑1 (MQ=255) agcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTg < 1:3506170/71‑1 (MQ=255) agcaATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTg < 1:2424863/71‑1 (MQ=255) caATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAg > 1:779711/1‑39 (MQ=255) caATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGa > 1:1465373/1‑52 (MQ=255) aaTACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatg > 1:2002285‑M2/1‑60 (MQ=255) aTACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTta > 1:2209071/1‑70 (MQ=255) tACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGtctc < 1:2518009/40‑1 (MQ=255) tACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGtctc < 1:1773461/40‑1 (MQ=255) tACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtata < 1:1070091/71‑1 (MQ=255) aCAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGaa > 1:1990098/1‑49 (MQ=255) aCAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtata > 1:3895950/1‑70 (MQ=255) cAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGat < 1:1555024‑M2/58‑3 (MQ=255) cAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataat < 1:4152356/71‑1 (MQ=255) cAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataa > 1:4408015/1‑70 (MQ=255) cAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataa > 1:746472/1‑70 (MQ=255) gCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataatat < 1:281540/71‑1 (MQ=255) tCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataatataa > 1:2716861/1‑69 (MQ=255) tCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataatata < 1:2118342/68‑1 (MQ=255) ccTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCa > 1:2516637/1‑38 (MQ=255) ccTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatgaa < 1:3139743‑M2/54‑6 (MQ=255) cTGATGCTCTTGATTTTCATTGGTTGTCTCCTGTTCAg < 1:3207165/38‑1 (MQ=255) cTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGt > 1:2331067/1‑45 (MQ=255) tGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatg > 1:1000826‑M2/1‑47 (MQ=255) tGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACa < 1:4381946/68‑1 (MQ=255) tGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACa < 1:1460837/68‑1 (MQ=255) gATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAg < 1:238101/36‑1 (MQ=255) aTGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATcc < 1:934333/70‑1 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGt < 1:1544890/41‑1 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAAc > 1:116981/1‑50 (MQ=255) tGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCt < 1:934554/71‑1 (MQ=255) ctctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGa > 1:2055744/1‑37 (MQ=255) ctctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGa > 1:2675321/1‑37 (MQ=255) ctctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTa < 1:3696344/70‑1 (MQ=255) tctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACaa > 1:2087104/1‑63 (MQ=255) tctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAAc > 1:1860078/1‑71 (MQ=255) ctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGa > 1:3908793/1‑35 (MQ=255) ctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGa > 1:658951/1‑35 (MQ=255) ctTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACg > 1:1999822/1‑71 (MQ=255) ttGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTtataatat < 1:2710107/56‑1 (MQ=255) tGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGatgaa < 1:630912‑M2/43‑6 (MQ=255) gATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATcc > 1:3747165/1‑62 (MQ=255) gATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTaa > 1:2322360/1‑66 (MQ=255) gATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACggg < 1:3696683/70‑1 (MQ=255) gATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACgg > 1:1017254/1‑69 (MQ=255) aTTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGgag < 1:4024695/71‑1 (MQ=255) aTTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGgag < 1:1661073/71‑1 (MQ=255) ttttCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGgaga < 1:1178274/71‑1 (MQ=255) ttCATcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcagg < 1:3139743‑M1/54‑50 (MQ=255) ttCATcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcagg < 1:3382550‑M1/54‑50 (MQ=255) tCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAAtt > 1:736089/1‑71 (MQ=255) cATcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtattgctgcttg > 1:3068059‑M1/1‑3 (MQ=255) cATcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtatt > 1:3321895‑M1/1‑3 (MQ=255) cATcgtactcattctgaacaggagactaccaatgaaaatcaagagcatca > 1:1000826‑M1/1‑3 (MQ=255) aTcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtattgctgcttgg < 1:1002019‑M1/71‑70 (MQ=255) aTcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtattgctgcttg < 1:4458300‑M1/70‑69 (MQ=255) aTcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtattgctgcttg < 1:1619090‑M1/70‑69 (MQ=255) aTcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctg < 1:4316157‑M1/58‑57 (MQ=255) ttGGTAGTCTCCTGTTCAGAATGAGTACGatgaaaatcaagagcatcaggaagg > 1:2443929‑M2/1‑29 (MQ=255) ttGGTAGTCTCCTGTTCAGAATGAGTACGatgaaaatcaagagcatcaggaagg > 1:2721139‑M2/1‑29 (MQ=255) ttGGTAGTCTCCTGTTCAGAATGAGTACGATGAATTGTTATATTATAACag < 1:451091/51‑2 (MQ=38) ttGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCa < 1:1622314/71‑1 (MQ=255) tcgtactcattctgaacaggagactaccaatgaaaatcaagagcatcaggaaggctgtattgctgcttg < 1:2633985‑M1/69‑69 (MQ=255) | CCCGCAGCAAAGCTCGTGGAGGTTAGCAGTGCAAGCAGCAATACAGCCTTCCTGATGCTCTTGATTTTCATTGGTAGTCTCCTGTTCAGAATGAGTACGATGAACTGTTATAATATAACAATCCCTAACGGGAGAATTCCA > minE/779616‑779756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |