Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2954081	2954382	302	36 [0]	[0] 31	[holD]	[holD]

ACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGT  >  minE/2954383‑2954453 |                                                                       aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:327683/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:9067/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:81058/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:75966/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:660248/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:627843/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:452497/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:447398/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:421243/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:360250/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:355126/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:341952/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:33737/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:334888/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:102648/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:323473/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:297676/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:275819/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:256234/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:251665/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:212745/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:212204/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:181047/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:172220/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:157935/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:142338/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:133305/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:11183/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:109726/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCACCGGCGCGCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:473868/71‑1 (MQ=255) aCTGGAAGGCGCTCAGGTGGCATCAACGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt  <  1:659929/71‑1 (MQ=255) |                                                                       ACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGT  >  minE/2954383‑2954453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑