Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2401888	2401898	11	39 [0]	[0] 29	xerC	site‑specific tyrosine recombinase

TACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCATT  >  minE/2401899‑2401945 |                                               tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:335920/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:959174/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:860806/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:838425/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:777694/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:760910/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:736928/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:576467/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:451466/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:43087/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:423182/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:376701/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:376054/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:374859/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1023227/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:335339/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:30983/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:233565/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:20673/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:160919/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1432811/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1402981/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1335792/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1269035/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1181632/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1161470/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:105055/47‑1 (MQ=255) tACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:1039609/47‑1 (MQ=255) tACATCACTTCAAGCATTGCACGGTCGCGTACAGCGAGGGGATCAtt  <  1:930914/47‑1 (MQ=255) |                                               TACATCACTTCCAGCATTGCACGGTCGCGTACAGCGAGGGGATCATT  >  minE/2401899‑2401945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑