Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1207318	1207323	6	28 [0]	[0] 9	manY	mannose‑specific enzyme IIC component of PTS

GACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGC  >  minE/1207324‑1207390 |                                                                   gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:1012424/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:1122627/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:1151907/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:1463154/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:2091239/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:663413/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACCGTTGCTTACCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:943364/1‑67 (MQ=255) gACCATCATCGTTCGTACTATTACAGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:1037468/1‑67 (MQ=255) gACCATCATCGTGCGTACTATTACCGTGGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGc  >  1:2098547/1‑67 (MQ=255) |                                                                   GACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGC  >  minE/1207324‑1207390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑