| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1611756 | 1 (0.020) | 39 (0.630) +A |
11/98 | NT | 62.4% | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | 2083040 = | 47 (0.740) | coding (66/663 nt) | yqjA | conserved inner membrane protein | |||||
TCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611691‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 | TCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCG < 1:2736941/71‑1TCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCG < 1:79563/71‑1 CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT < 1:3951926/71‑1 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:1853129/1‑71 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:1383828/1‑71 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:1820149/1‑71 AACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATT < 1:3395794/71‑1 AACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATT < 1:1428868/71‑1 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA > 1:3112629/1‑71 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA > 1:2074203/1‑71 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA > 1:1107044/1‑71 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA > 1:889908/1‑71 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT < 1:112683/71‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:1435931/70‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:3916772/70‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATt < 1:3951314/71‑2 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT < 1:1626518/70‑1 ATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGA < 1:1954823/54‑1 ATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGA < 1:1236099/54‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATtt < 1:4073192/70‑3 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATtt < 1:2581010/70‑3 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGA < 1:3540070/53‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca < 1:756891/71‑4 ATTGCCGAACAATGTGGTCTTTAGTCTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca < 1:3073721/71‑4 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:3141659/1‑55 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:631503/1‑55 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca > 1:4172450/1‑62 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:1029293/1‑59 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:4147289/1‑59 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT > 1:204774/1‑59 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTT > 1:3374006/1‑61 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCG < 1:2779896/46‑1 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAAT < 1:1249035/38‑1 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAAT < 1:3487258/38‑1 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:2530963/1‑40 TAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATtt > 1:870166/1‑44 TAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATtt > 1:1010998/1‑44 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGC < 1:139317/39‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGC < 1:4028224/39‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGC < 1:4152452/39‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGC < 1:3691280/39‑1 ATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:4088541/36‑1 ATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:4155407/36‑1 ATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:3024080/36‑1 ATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:1362878/36‑1 AAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATt > 1:4051471/1‑35 AAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATt > 1:2432237/1‑35 | TCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611691‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |