| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1611756 | 1 (0.020) | 39 (0.630) +A |
11/98 | NT | 62.4% | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | 2083040 = | 47 (0.740) | coding (66/663 nt) | yqjA | conserved inner membrane protein | |||||
Only 100 of 108 total aligned reads displayed.
ATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGC > minE/2082971‑2083108 | atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCAt > 1:434653/1‑71 (MQ=255)atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCAt > 1:3717911/1‑71 (MQ=255) tgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATc > 1:3051048/1‑71 (MQ=255) tgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATc > 1:922491/1‑71 (MQ=255) tccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCg < 1:2736941‑M2/4‑1 (MQ=255) tccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCg < 1:79563‑M2/4‑1 (MQ=255) cttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgat < 1:3951926‑M2/6‑1 (MQ=255) atgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat < 1:1130922/71‑1 (MQ=255) atgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat > 1:2720695/1‑71 (MQ=255) atgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat < 1:2446296/71‑1 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgatg < 1:851676/71‑1 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgatg < 1:358725/71‑1 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgatgat < 1:2069858/71‑1 (MQ=255) aaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgatgat > 1:1383828‑M2/63‑71 (MQ=255) aaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgatgat > 1:1853129‑M2/63‑71 (MQ=255) aaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgatgat > 1:1820149‑M2/63‑71 (MQ=255) aactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGAtt < 1:1428868‑M2/10‑1 (MQ=255) aactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGAtt < 1:3395794‑M2/10‑1 (MQ=255) aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat < 1:4234539/67‑1 (MQ=255) aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat < 1:3410424/67‑1 (MQ=255) aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat < 1:2218504/67‑1 (MQ=255) cTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTgg < 1:605128/71‑1 (MQ=255) gatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCa > 1:889908‑M2/58‑71 (MQ=255) gatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCa > 1:1107044‑M2/58‑71 (MQ=255) gatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCa > 1:3112629‑M2/58‑71 (MQ=255) ttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAt > 1:609769/1‑71 (MQ=255) atatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCa < 1:1435931‑M2/14‑1 (MQ=255) atatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCa < 1:3916772‑M2/14‑1 (MQ=255) atatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAt < 1:112683‑M2/15‑1 (MQ=255) tatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCatt < 1:3951314‑M2/16‑2 (MQ=255) tatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAt < 1:1626518‑M2/15‑1 (MQ=255) tGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgatg > 1:3446315/1‑62 (MQ=255) tGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtg > 1:779500/1‑71 (MQ=255) tacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGcattt < 1:4073192‑M2/17‑3 (MQ=255) tacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGcattt < 1:2581010‑M2/17‑3 (MQ=255) cccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgt < 1:2576152/69‑1 (MQ=255) attgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGgcatttttca < 1:756891‑M2/21‑4 (MQ=255) attgccgaacaatgtggtctttagtctcataagtcgttccctcaggaagaATCGATGATTGgcatttttca < 1:3073721‑M2/21‑4 (MQ=255) gccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgatga > 1:631503‑M2/48‑55 (MQ=255) gccgaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCgatga > 1:3141659‑M2/48‑55 (MQ=255) tgctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCATGGCCAATCCATCGATGATTGGCATGTTGTAtttt > 1:3010516/1‑71 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTg > 1:4115013/1‑71 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGgcatttttca > 1:4172450‑M2/45‑62 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAt > 1:1029293‑M2/45‑59 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAt > 1:4147289‑M2/45‑59 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAt > 1:204774‑M2/45‑59 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtg < 1:1174347/59‑1 (MQ=255) aacaatgtggtctttagtttcataagtcgttccctcaggaagaATCGATGATTGGCAtttt > 1:3374006‑M2/44‑61 (MQ=255) acaatgtggtctttagtttcataagtcgttccctcaggaagaATCg < 1:2779896‑M2/4‑1 (MQ=255) cAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTc < 1:3756660/69‑1 (MQ=255) cAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTc < 1:1544510/69‑1 (MQ=255) aGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgt > 1:2196622/1‑71 (MQ=255) cccTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt > 1:2508256/1‑71 (MQ=255) cccTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt > 1:2043744/1‑71 (MQ=255) cccTGTGGGCGCAGGATTTTGAAACCCTGGCAAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt > 1:2258598/1‑71 (MQ=255) accTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt > 1:3796870/2‑71 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagaAt < 1:1249035‑M2/2‑1 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagaAt < 1:3487258‑M2/2‑1 (MQ=255) ccTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgtttg > 1:3011095/1‑71 (MQ=255) tgGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgtt > 1:2235205/1‑50 (MQ=255) ggCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:2827592/70‑1 (MQ=255) ggCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:1231009/70‑1 (MQ=255) ggCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:2782128/70‑1 (MQ=255) tagtttcataagtcgttccctcaggaagaATCGATGATTGGcattt > 1:870166‑M2/30‑44 (MQ=255) tagtttcataagtcgttccctcaggaagaATCGATGATTGGcattt > 1:1010998‑M2/30‑44 (MQ=255) gcgcTGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:3235586/69‑1 (MQ=255) cgcAGGATTTCGAAACACTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:690289/68‑1 (MQ=255) tttcataagtcgttccctcaggaagaATCGATGATTGGc < 1:4152452‑M2/13‑1 (MQ=255) tttcataagtcgttccctcaggaagaATCGATGATTGGc < 1:139317‑M2/13‑1 (MQ=255) tttcataagtcgttccctcaggaagaATCGATGATTGGc < 1:4028224‑M2/13‑1 (MQ=255) tttcataagtcgttccctcaggaagaATCGATGATTGGc < 1:3691280‑M2/13‑1 (MQ=255) gATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt > 1:2401302/1‑71 (MQ=255) ataagtcgttccctcaggaagaATCGATGATTGGCa < 1:1362878‑M2/14‑1 (MQ=255) ataagtcgttccctcaggaagaATCGATGATTGGCa < 1:4155407‑M2/14‑1 (MQ=255) ataagtcgttccctcaggaagaATCGATGATTGGCa < 1:4088541‑M2/14‑1 (MQ=255) ttttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCtt > 1:1345420/1‑70 (MQ=255) aagtcgttccctcaggaagaATCGATGATTGGCatt > 1:2432237‑M2/21‑35 (MQ=255) aagtcgttccctcaggaagaATCGATGATTGGCatt > 1:4051471‑M2/21‑35 (MQ=255) ttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGa > 1:3899990/1‑70 (MQ=255) ttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGa < 1:1409706/70‑1 (MQ=255) ttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGa > 1:2922776/1‑70 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:2204267/70‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:2581685/70‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:3785875/70‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:3790487/70‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:1614050/70‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:2685337/70‑1 (MQ=255) cTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctt > 1:3177038/1‑71 (MQ=255) aTCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAttttc > 1:3461085/1‑46 (MQ=255) aTCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcg > 1:1732192/1‑71 (MQ=255) aTCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcg > 1:445462/1‑71 (MQ=255) aTCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcg > 1:2275907/1‑71 (MQ=255) tCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc < 1:227665/50‑1 (MQ=255) tCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc < 1:1358814/50‑1 (MQ=255) tCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc < 1:2357594/50‑1 (MQ=255) ccATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAtt < 1:3528928/42‑1 (MQ=255) ccATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggc > 1:2375255/1‑71 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCttgtttgt < 1:4221824/37‑1 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCttgtttgt < 1:831474/37‑1 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCttgtttgt < 1:3214385/37‑1 (MQ=255) | ATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGC > minE/2082971‑2083108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |