New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1499913	41 (0.860)	13 (0.340) +ATATCACCAG	4/82	NT	24.5%	coding (1314/1626 nt)	mdoD	glucan biosynthesis protein, periplasmic
	?	W3110S.gb	1787483 =	59 (1.240)					coding (1344/2379 nt)	pps	phosphoenolpyruvate synthase

CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCA  >  W3110S.gb/1787483‑1787496                  ||||||||||               agGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC   >  1:1957181/3‑40 agGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC   >  1:419153/3‑40   GGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC   >  1:2967190/1‑38   GGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC   <  1:4411545/38‑1   GGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC   >  1:615880/1‑38    GTGAACACTATCCCATATCACCAGCTCACCGTCTTTCA  >  1:631796/1‑38    GTGAACACTATCCCATATCACCAGCTCACCGTCTTT    <  1:3046398/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC   <  1:1634429/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC   <  1:611651/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT    <  1:1384387/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT    <  1:1530326/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT    <  1:2487708/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT    <  1:3194004/35‑1                  ||||||||||               CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCA  >  W3110S.gb/1787483‑1787496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.