| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1963538 | 28 (0.570) | 3 (0.080) | 3/80 | NT | 10.8% | intergenic (+29/‑148) | argS/yecT | arginyl‑tRNA synthetase/hypothetical protein |
| ? | W3110S.gb | = 1963548 | 27 (0.690) | intergenic (+39/‑138) | argS/yecT | arginyl‑tRNA synthetase/hypothetical protein | |||||
CTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1963459‑1963538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgatcGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGC < W3110S.gb/1963548‑1963479 CTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGA < 1:4133450/71‑1 AAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGC < 1:4234184/71‑1 AAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAA < 1:913561/69‑1 AAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAA < 1:3390208/69‑1 GCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCT > 1:1902965/1‑71 GGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGA > 1:470751/1‑62 GTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGA < 1:2995801/68‑1 TGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGAT > 1:1949217/1‑66 CTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGAT < 1:3958711/58‑1 CTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGAT < 1:1185444/58‑1 TATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTG < 1:682801/51‑1 TTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCGGCTAACCCTGATCAGGCT < 1:1637411/71‑1 TTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTAAAGCCTGATCGGCTAACCCTGATCAGG < 1:189244/69‑1 GAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCT > 1:2018005/1‑46 TCGATTTTTCGTGAGAGTGAAGCCTGATCGGCTAACCCTGAT < 1:3225397/42‑1 GCCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATT < 1:3526338/49‑1 CCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCT < 1:630784/66‑1 CCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAG < 1:2203801/63‑1 CCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTA < 1:3461033/49‑1 CTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATAC > 1:1772599/1‑71 CTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTC < 1:2751819/66‑1 TGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACC > 1:1024986/1‑71 TGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGT > 1:1709355/1‑62 GATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCA > 1:3125733/1‑65 GATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTC < 1:2459742/64‑1 ATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATA > 1:3597091/1‑67 ATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTA < 1:199752/45‑1 TCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGAT > 1:1180821/1‑42 CGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGC > 1:3980125/1‑71 CGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTA < 1:3252264/43‑1 CGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTA < 1:635634/43‑1 CTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1963459‑1963538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgatcGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGC < W3110S.gb/1963548‑1963479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |