| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1963538 | 28 (0.570) | 3 (0.080) | 3/80 | NT | 10.8% | intergenic (+29/‑148) | argS/yecT | arginyl‑tRNA synthetase/hypothetical protein |
| ? | W3110S.gb | = 1963548 | 27 (0.690) | intergenic (+39/‑138) | argS/yecT | arginyl‑tRNA synthetase/hypothetical protein | |||||
GCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTG > W3110S.gb/1963479‑1963616 | gCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCg > 1:3980125‑M2/1‑70 (MQ=255) ggTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatca > 1:1024986‑M2/1‑66 (MQ=255) gTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcag > 1:1772599‑M2/1‑65 (MQ=255) tATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgat > 1:3597091‑M2/1‑64 (MQ=255) tGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatc > 1:3125733‑M2/1‑61 (MQ=255) gagaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcag < 1:2751819‑M2/66‑7 (MQ=255) gagaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatc < 1:2459742‑M2/64‑5 (MQ=255) agaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcagg < 1:630784‑M2/66‑8 (MQ=255) agaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCttt < 1:332250/70‑1 (MQ=255) gaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCttttt < 1:829401/71‑1 (MQ=255) gaCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCttttt < 1:3775829/71‑1 (MQ=255) aCTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatca > 1:1709355‑M2/1‑57 (MQ=255) cTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcagg < 1:2203801‑M2/63‑8 (MQ=255) tAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTAt < 1:460787/69‑1 (MQ=255) agagCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTg > 1:4191319/1‑70 (MQ=255) aTGTAATCTATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCttttt < 1:2431711/58‑1 (MQ=255) tGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTaa < 1:2923393/70‑1 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcagg < 1:3461033‑M2/49‑8 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgat < 1:199752‑M2/45‑4 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCg < 1:635634‑M2/43‑2 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCg < 1:3252264‑M2/43‑2 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCttttt > 1:48832/1‑55 (MQ=255) tAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATg < 1:708876/71‑1 (MQ=255) aaTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCgatcaggc < 1:3526338‑M2/49‑9 (MQ=255) aaTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATg > 1:227577/1‑70 (MQ=255) aTCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCga > 1:1180821‑M2/1‑40 (MQ=255) gATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATc > 1:1993239/1‑60 (MQ=255) gATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTc > 1:2900019/1‑71 (MQ=255) aTTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATc < 1:4158582/59‑1 (MQ=255) aTTTTTCGTGAGAGTGAAGCCTGAT‑A‑GGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTg > 1:2811873/1‑70 (MQ=255) cGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa < 1:2206962/70‑1 (MQ=255) gTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaa < 1:1267227/67‑1 (MQ=255) tGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTaa < 1:1377739/48‑1 (MQ=255) tGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGc > 1:1991294/1‑71 (MQ=255) tGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGc > 1:1999053/1‑71 (MQ=255) aaGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCa > 1:3191731/1‑71 (MQ=255) aaGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCa > 1:1837921/1‑71 (MQ=255) aGCCTGATCAGGGTTAGCCgatcaggcttcactctcacgaaaaatcgattacatacgctctacagtctcaa < 1:1637411‑M2/71‑53 (MQ=255) ccTGATCAGGGTTAGCCgatcaggctttactctcacgaaaaatcgattacatacgctctacagtctcaa < 1:189244‑M2/69‑53 (MQ=255) ccTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTg < 1:3464422/71‑1 (MQ=255) tGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTAt < 1:3762146/47‑1 (MQ=255) gATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGttt > 1:1723850/1‑71 (MQ=255) gATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt < 1:2733034/70‑1 (MQ=255) aTCAGGGTTAGCCgatcaggcttcactctcacgaaaaatcga < 1:3225397‑M2/42‑30 (MQ=255) aTCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt < 1:2375922/69‑1 (MQ=255) aTCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt < 1:994421/69‑1 (MQ=255) aTCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt < 1:2936798/69‑1 (MQ=255) aTCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGtt < 1:2027510/69‑1 (MQ=255) aGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTtct > 1:2918125/1‑70 (MQ=255) gTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTa > 1:1801512/1‑38 (MQ=255) ttAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGaaaa > 1:4023902/1‑46 (MQ=255) gCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGtt < 1:1099519/70‑1 (MQ=255) ccGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCAtt < 1:80354/55‑1 (MQ=255) ccGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCACACTGTTg > 1:3997485/1‑70 (MQ=255) | GCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTGCCATCTAAATGTATTCTGAAAATGGACATGCCATTGTTTTCTCACTGTTG > W3110S.gb/1963479‑1963616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |