New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | = 2401919 | 50 (1.030) | 8 (0.200) +GGCATTTCA |
3/82 | NT | 14.5% | coding (194/978 nt) | nuoH | NADH:ubiquinone oxidoreductase, membrane subunit H |
? | W3110S.gb | = 2562879 | 65 (1.330) | coding (1247/1362 nt) | eutB | ethanolamine ammonia‑lyase, large subunit, heavy chain |
TTAAAGAACATTTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2401904‑2401919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCAGTTACTCAAC < W3110S.gb/2562879‑2562866 ||||||||| gTAAAGAACATTTTGAGGCATTTCAGTCAGTTACTCAA > 1:2924440/2‑38 gTAAAGAACATTTTGAGGCATTTCAGTCAGTTACTC < 1:3060155/35‑1 TAAAGAACATTTTGAGGCATTTCAGTCAGTTACTCAAt > 1:3921216/1‑37 TAAAGAACATTTTGAGGCATTTCAGTCAGTTACTCAA < 1:250070/37‑1 TAAAGAACATTTTGAGGCATTTCAGTCAGTTACTCA < 1:3664334/36‑1 AAAGAACATTTTGAGGCATTTCAGTCAGTTACTCAAt > 1:1193120/1‑36 AAAGAACATTTTGAGGCATTTCAGTCAGTTACTCAA > 1:289253/1‑36 AAGAACATTTTGAGGCATTTCAGTCAGTTACTCAAt > 1:3643587/1‑35 ||||||||| TTAAAGAACATTTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2401904‑2401919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCAGTTACTCAAC < W3110S.gb/2562879‑2562866 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |