| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3309695 = | 45 (0.920) | 4 (0.090) | 3/94 | NT | 9.1% | coding (1398/2205 nt) | pnp | polynucleotide phosphorylase/polyadenylase |
| ? | W3110S.gb | 3309732 = | 38 (0.830) | coding (1361/2205 nt) | pnp | polynucleotide phosphorylase/polyadenylase | |||||
CAAATTCCCGTACACCGTACGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3309767‑3309695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGCT > W3110S.gb/3309732‑3309801 CAAATTCCCGTACACCGTACGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCG < 1:4554474/71‑1 ATTCCCGTACACCGTTCGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGT < 1:1046547/69‑1 TGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGT < 1:3017367/42‑1 ATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCG > 1:2405919/1‑37 ATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCG > 1:2739835/1‑37 CACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTGATTTCAGACACAACACGTACGGTGTACGGGAATT > 1:3995921/1‑71 ACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTGATTTCAGACACAACACGTACGGTGTACGGGAATTT > 1:4554308/1‑71 ACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTGATTTCAGACACAACACGTACGGTGTACGGGAATTT > 1:4559464/1‑71 ACGGTTCCTCTTCTATGGATTCAGTGATTTCAGACACAACACGTACGG < 1:914633/48‑1 GTGATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTCCCAGCACGCCGC < 1:817714/70‑1 TGATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGC > 1:1058929/1‑71 TGATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGC < 1:2013500/71‑1 TGATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGC > 1:2497239/1‑71 GATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGCT > 1:1379337/1‑71 CAAATTCCCGTACACCGTACGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/3309767‑3309695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgATTTCAGACACAACACGTACGGTGTACGGGAATTTGTCCATATCCGGCATGACTGCCAGCACGCCGCGCT > W3110S.gb/3309732‑3309801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |