| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3309695 = | 45 (0.920) | 4 (0.090) | 3/94 | NT | 9.1% | coding (1398/2205 nt) | pnp | polynucleotide phosphorylase/polyadenylase |
| ? | W3110S.gb | 3309732 = | 38 (0.830) | coding (1361/2205 nt) | pnp | polynucleotide phosphorylase/polyadenylase | |||||
CCATTGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACGGTGTACGG > W3110S.gb/3309625‑3309760 | ccATTGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGcac < 1:1175614/71‑1 (MQ=255)agcgcggcgtgctggcagtcatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatc > 1:1379337‑M1/71‑71 (MQ=255) gcgcggcgtgctggcagtcatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatCa > 1:1058929‑M1/70‑71 (MQ=255) gcgcggcgtgctggcagtcatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatCa > 1:2497239‑M1/70‑71 (MQ=255) gcgcggcgtgctggcagtcatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatCa < 1:2013500‑M1/2‑1 (MQ=255) aTTGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGAGCCAGAGACGCGCCGCacac > 1:3429961/1‑71 (MQ=255) ttGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACg > 1:2211196/1‑71 (MQ=255) gcggcgtgctgggagtcatgccggatatggacaaattcccgtacaccgtacgtgttgtgtctgaaatCAc < 1:817714‑M1/3‑1 (MQ=255) tGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACg > 1:467600/1‑70 (MQ=255) gCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACgg > 1:1178526/1‑70 (MQ=255) gCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACg > 1:3836708/1‑69 (MQ=255) cGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGa < 1:1102820/70‑1 (MQ=255) aTACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGc < 1:4344692/71‑1 (MQ=255) tACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGa > 1:1355085/1‑67 (MQ=255) tACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGc > 1:4562540/1‑70 (MQ=255) cccGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCa > 1:4403475/1‑70 (MQ=255) cAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATagaa < 1:1014884/71‑1 (MQ=255) cAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATag > 1:4175078/1‑69 (MQ=255) aaCGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATag > 1:2734202/1‑68 (MQ=255) aaCGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATag > 1:3119162/1‑68 (MQ=255) ggCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAagag > 1:64592/1‑70 (MQ=255) ggCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAgg < 1:401921/71‑1 (MQ=255) ttGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGtt > 1:1080715/1‑71 (MQ=255) tGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTg > 1:4332423/1‑71 (MQ=255) aTCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGa < 1:2940359/71‑1 (MQ=255) aTCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGa < 1:2935206/71‑1 (MQ=255) tCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGAt > 1:4433718/1‑71 (MQ=255) cacaCCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAg > 1:2089575/1‑71 (MQ=255) acacCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGt < 1:3617919/71‑1 (MQ=255) aaattcccgtacaccgtacgtgttgtgtctgaaatCACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGt > 1:4554308‑M1/36‑71 (MQ=255) aaattcccgtacaccgtacgtgttgtgtctgaaatCACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGt > 1:4559464‑M1/36‑71 (MQ=255) cacCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGt > 1:465277/1‑70 (MQ=255) aattcccgtacaccgtacgtgttgtgtctgaaatCACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTg > 1:3995921‑M1/35‑71 (MQ=255) acCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTc < 1:4251055/66‑1 (MQ=255) cTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGAtt > 1:1538482/1‑71 (MQ=255) gCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGAttt > 1:1009302/1‑70 (MQ=255) gCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGAttt > 1:303377/1‑70 (MQ=255) tCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAagag < 1:4206139/45‑1 (MQ=255) tCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGt > 1:3104696/1‑52 (MQ=255) tCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGt > 1:2784444/1‑52 (MQ=255) tCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGa < 1:3564157/71‑1 (MQ=255) aTCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGa < 1:4093205/68‑1 (MQ=255) tCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAagag < 1:1790736/41‑1 (MQ=255) ccgtacgtgttgtgtctgaaatCACTGAATCCATAGAAGAGGAACCGt < 1:914633‑M1/26‑1 (MQ=255) cAGCGCCAGAGACGCGCCGCACACGGAAGCCATagaag > 1:298714/1‑38 (MQ=255) cAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTc > 1:86383/1‑54 (MQ=255) cAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACacaa > 1:1542080/1‑71 (MQ=255) aGCGCCAGAGACGCGCGGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCa > 1:2330026/1‑63 (MQ=255) aGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGtt > 1:943674/1‑47 (MQ=255) aGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACacaac < 1:1458351/71‑1 (MQ=255) gcCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACg > 1:4275432/1‑71 (MQ=255) ccAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGt < 1:31640/71‑1 (MQ=255) agagACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTAc > 1:4186842/1‑71 (MQ=255) agagACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTAc > 1:1865251/1‑71 (MQ=255) gagaCGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTAct > 1:2967436/1‑70 (MQ=255) gagaCGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTAc > 1:4121238/1‑70 (MQ=255) agaCGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACgg > 1:3035841/1‑71 (MQ=255) gaCGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACGgt < 1:4347335/71‑1 (MQ=255) aCGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGa > 1:1701798/1‑55 (MQ=255) gcgcCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAg > 1:3230974/1‑43 (MQ=255) ccgcACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACGGTGTACgg > 1:96471/1‑71 (MQ=255) cgcACACGGAAGCCATAGAAGAGGAACCGTTGGATTCa > 1:476964/1‑38 (MQ=255) cgcACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACGGTGTACgg > 1:4289988/1‑70 (MQ=255) | CCATTGCGATACCCGCAACGGCAGCTTTGATCGGCACACCTGCGTCCATCAGCGCCAGAGACGCGCCGCACACGGAAGCCATAGAAGAGGAACCGTTGGATTCAGTGATTTCAGACACAACACGTACGGTGTACGG > W3110S.gb/3309625‑3309760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |