| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 641963 | 40 (0.820) | 50 (1.250) +AGAACTGTT |
5/82 | NT | 56.0% | coding (653/1239 nt) | ybdR | predicted oxidoreductase, Zn‑dependent and NAD(P)‑binding |
| ? | W3110S.gb | 1868457 = | 56 (1.150) | intergenic (‑271/‑165) | mipA/yeaG | scaffolding protein for murein synthesizing machinery/conserved hypothetical protein with nucleoside triphosphate hydrolase domain | |||||
Only 100 of 101 total aligned reads displayed.
CTGGTCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAAGA > W3110S.gb/641894‑642032 | cTGGTCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGa < 1:756250/70‑1 (MQ=255) tCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcat < 1:3754596/70‑1 (MQ=255) cTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatcat > 1:2500280/1‑71 (MQ=255) cTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatcat > 1:4201683/1‑71 (MQ=255) cTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatca < 1:2658651/70‑1 (MQ=255) tgGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATccc > 1:3843198/1‑71 (MQ=255) tgGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATccc > 1:3839338/1‑71 (MQ=255) tgGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATccc < 1:3418942/71‑1 (MQ=255) ggATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTa > 1:2801433/1‑71 (MQ=255) ttgttgACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatca > 1:4458377/1‑62 (MQ=255) ttgttgACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTAcc > 1:4536371/1‑70 (MQ=255) gACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatca > 1:1919767/1‑57 (MQ=255) gACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTg < 1:1101156/70‑1 (MQ=255) gACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTg > 1:1386299/1‑70 (MQ=255) aTCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCAtt < 1:1886001/70‑1 (MQ=255) tCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatca > 1:2031755/1‑52 (MQ=255) tCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatc < 1:2611710/48‑1 (MQ=255) tCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTc > 1:783596/1‑71 (MQ=255) cGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatcat > 1:3310906/1‑52 (MQ=255) gCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGat > 1:4344974/1‑45 (MQ=255) gCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTcgc > 1:713036/1‑71 (MQ=255) gCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTcg < 1:2543904/70‑1 (MQ=255) tgCACGTTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatcatca > 1:10401/1‑45 (MQ=255) aCGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGatc < 1:284614/38‑1 (MQ=255) cGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCa > 1:2677630/1‑56 (MQ=255) aacggTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaag > 1:2953948‑M1/3‑30 (MQ=255) aacggTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaag > 1:2401107‑M1/3‑30 (MQ=255) acgGTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaaggtg > 1:3595499‑M1/2‑29 (MQ=255) acgGTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaaggt < 1:2071070‑M1/47‑20 (MQ=255) acgGTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaaggt < 1:2892136‑M1/47‑20 (MQ=255) acgGTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:3358412‑M1/2‑29 (MQ=255) cGGTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:3406317‑M1/50‑23 (MQ=255) cGGTGAGAAACAGATTTTTTGTTGTTGAagaactgtttttt < 1:4227811‑M1/41‑14 (MQ=255) ggTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTAc > 1:1187128/1‑39 (MQ=255) ggTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGgcgc > 1:341259/1‑71 (MQ=255) ggTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGgcgc > 1:1755502/1‑71 (MQ=255) ggTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGgcgc < 1:393037/71‑1 (MQ=255) ggTGAGAAACAGATTTTTTGTTGTTGAagaactgttttttgaagg > 1:1833287‑M1/1‑27 (MQ=255) ggAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATcc > 1:2587726/1‑71 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtag < 1:2115611‑M1/43‑24 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:3761256‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:3352355‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:1532519‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:2902900‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:1831078‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:1146234‑M1/42‑23 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:1685898‑M1/2‑21 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:4074947‑M1/2‑21 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:667108‑M1/2‑21 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttga < 1:3904495‑M1/35‑16 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttg > 1:1103156‑M1/2‑21 (MQ=255) aaacAGATTTTTTGTTGTTGAagaactgttttttg < 1:513051‑M1/34‑15 (MQ=255) aaCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtag < 1:2609137‑M1/43‑24 (MQ=255) aaCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtag < 1:773669‑M1/43‑24 (MQ=255) aaCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgta < 1:1145266‑M1/42‑23 (MQ=255) aaCAGATTTTTTGTTGTTGAagaactgttttttgaaggt < 1:2171273‑M1/39‑20 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:3792494‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:1249401‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:4024064‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:4447040‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:3784017‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:2442347‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:1414607‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:1791081‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:1409307‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtaga > 1:2991827‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtag < 1:704101‑M1/42‑24 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggtgtag < 1:467482‑M1/42‑24 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaaggt > 1:1545019‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaag > 1:1448074‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:607083‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:1667085‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:1238611‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:1557259‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:2071847‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:1076327‑M1/1‑19 (MQ=255) aCAGATTTTTTGTTGTTGAagaactgttttttgaa > 1:842194‑M1/1‑19 (MQ=255) aCAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCg < 1:41726/70‑1 (MQ=255) aCAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGa > 1:2626339/1‑71 (MQ=255) aGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTg < 1:4600054/35‑1 (MQ=255) aGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTg < 1:4317238/35‑1 (MQ=255) aGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTa > 1:102483/1‑55 (MQ=255) gA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGAtt > 1:396395/1‑70 (MQ=255) gA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGAtt > 1:4385241/1‑70 (MQ=255) a‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCgccgcc > 1:4556747/1‑45 (MQ=255) ttttttgTTGTTGAagaactgttttttgatggtgta < 1:595131‑M1/35‑23 (MQ=255) tttttGTTGTTGAagaactgttttttgaaggtgta < 1:4297624‑M1/35‑23 (MQ=255) tttttGTTGTTGAagaactgttttttgaaggtgta > 1:1613288‑M1/1‑13 (MQ=255) ttttGTTGTTGAagaactgttttttgaaggtgtag > 1:4087082‑M1/1‑12 (MQ=255) ttttGTTGTTGAagaactgttttttgaaggtgtag > 1:4081723‑M1/1‑12 (MQ=255) tgttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAAtttt < 1:2227127/70‑1 (MQ=255) tgttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAAtttt < 1:2221887/70‑1 (MQ=255) tgttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAAtttt < 1:112459/70‑1 (MQ=255) tgttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAAtttt < 1:3278799/70‑1 (MQ=255) gttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTtg < 1:1735950/70‑1 (MQ=255) gttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTtg < 1:3906809/70‑1 (MQ=255) ttgttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTtga < 1:1274533/70‑1 (MQ=255) ttgATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGaa < 1:3714075/71‑1 (MQ=255) gATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGAtt < 1:1348692/57‑1 (MQ=255) atcatcatcCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAAGa > 1:1624319/1‑70 (MQ=255) | CTGGTCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGA‑TTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAAGA > W3110S.gb/641894‑642032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |