| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1225529 | 28 (0.570) | 11 (0.300) +GCAAAAGATTAC |
6/76 | NT | 36.7% | intergenic (+45/+327) | ycgI/minE | hypothetical protein/cell division topological specificity factor |
| ? | W3110S.gb | = 3595831 | 22 (0.450) | intergenic (+56/+214) | mobB/rrfA | molybdopterin‑guanine dinucleotide biosynthesis protein B/5S ribosomal RNA | |||||
GCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATG > W3110S.gb/1225461‑1225595 | gCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGAt < 1:1560506/71‑1 (MQ=255) gtgAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTg > 1:1786500/1‑69 (MQ=255) tgAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTg > 1:4317645/1‑68 (MQ=255) tgAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGaaa < 1:3318078/71‑1 (MQ=255) tgAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGaa < 1:346472/70‑1 (MQ=255) tCGTGCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGaaaaa < 1:2951615/71‑2 (MQ=255) gTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTc < 1:3635734/71‑1 (MQ=255) tCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTg > 1:3893122/1‑71 (MQ=255) cTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTgg > 1:118119/1‑71 (MQ=255) tGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTggg > 1:3514123/1‑71 (MQ=255) tGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTggg > 1:1611607/1‑71 (MQ=255) tCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGaaaa < 1:2313668/58‑1 (MQ=255) tCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCaaa > 1:1040176/1‑70 (MQ=255) cAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGaaaa < 1:1948532/57‑1 (MQ=255) aaCGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCaaaaa < 1:478664/70‑1 (MQ=255) aCGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCaaaaaaa < 1:2453001/71‑1 (MQ=255) aCGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCaaa < 1:1531040/67‑1 (MQ=255) gATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGaaa < 1:2705250/46‑1 (MQ=255) aTTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCaaaaaaa > 1:4432108/1‑68 (MQ=255) tAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTgggg > 1:246057/1‑58 (MQ=255) aCTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGa < 1:1633947/38‑1 (MQ=255) cgcTTCGACGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTa > 1:2966051/1‑71 (MQ=255) cTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTAcg > 1:1259572/1‑71 (MQ=255) cGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTAcggcg > 1:4085979/1‑71 (MQ=255) tttttcGTTTACAGGgcaaaagattacgcgcagaaaaaa > 1:2129735‑M1/2‑15 (MQ=255) tttttcGTTTACAGGgcaaaagattacgcgcagaaaa > 1:3080823‑M1/2‑15 (MQ=255) tttttcGTTTACAGGgcaaaagattacgcgcagaaa > 1:1960959‑M1/2‑15 (MQ=255) ttttCGTTTACAGGgcaaaagattacgcgcagaaaaaaa < 1:1928075‑M1/39‑26 (MQ=255) ttttCGTTTACAGGgcaaaagattacgcgcagaaaaaaa > 1:3762045‑M1/1‑14 (MQ=255) ttttCGTTTACAGGgcaaaagattacgcgcaaaaaaa < 1:3823860‑M1/37‑24 (MQ=255) ttttCGTTTACAGGgcaaaagattacgcgcaaaaaaa < 1:630792‑M1/37‑24 (MQ=255) tttCGTTTACAGGgcaaaagattacgcgcagaaaaaa < 1:2804250‑M1/37‑25 (MQ=255) ttCGTTTACAGGgcaaaagattacgcgcagaaaaaaa > 1:2130856‑M1/1‑12 (MQ=255) ttCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTc < 1:1977069/70‑1 (MQ=255) ttCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCa > 1:2886845/1‑71 (MQ=255) tCGTTTACAGGgcaaaagattacgcgcagaaaaaaa > 1:1498089‑M1/1‑11 (MQ=255) tCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGaa < 1:3364357/64‑1 (MQ=255) tCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCAt > 1:2888385/1‑71 (MQ=255) gTTTACAGGgcaaaagattacgcgcagaaaaaaag > 1:249712‑M1/1‑9 (MQ=255) tACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTa < 1:4355700/70‑1 (MQ=255) aCAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGtt > 1:3906515/1‑48 (MQ=255) aCAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATg > 1:1286317/1‑71 (MQ=255) gATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATcc < 1:1342862/63‑1 (MQ=255) | GCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTTACAGGATGTTGAAAGGGAAAATTCTGGGGCAAAAAAAGCCCGCCAGTTACGGCGGGAAACCTCATCCTATG > W3110S.gb/1225461‑1225595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |