| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 7063 | 66 (1.330) | 16 (0.350) +GATT |
9/90 | NT | 32.6% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | W3110S.gb | = 2564144 | 6 (0.120) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT < W3110S.gb/2564144‑2564078 |||| tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:1941156/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA < 1:3995720/68‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGA < 1:247246/43‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:3074123/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:4324625/70‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTG > 1:3649692/1‑60 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTT > 1:53357/1‑39 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAA > 1:2591786/1‑42 AATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGA > 1:795856/1‑49 ATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:1903718/1‑41 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:3362001/65‑1 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTG < 1:4751017/52‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:1086908/61‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT > 1:1931533/1‑53 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA < 1:2742563/62‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTA < 1:1551666/38‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:1532848/1‑61 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:4768276/1‑61 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:997786/44‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:977453/44‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:3397525/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2105203/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2165853/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2406658/1‑71 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:3244596/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:3462103/56‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA < 1:345760/43‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA < 1:3436114/43‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:765378/36‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:1629354/1‑71 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:1623256/1‑69 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGT > 1:2768619/1‑46 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT > 1:2429911/1‑71 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT > 1:4398653/1‑71 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:866376/1‑70 TTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGT < 1:431085/53‑1 |||| ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGAT < W3110S.gb/2564144‑2564078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |