| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 7063 | 66 (1.330) | 16 (0.350) +GATT |
9/90 | NT | 32.6% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | W3110S.gb | = 2564144 | 6 (0.120) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
Only 100 of 106 total aligned reads displayed.
GCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAA > W3110S.gb/6998‑7132 | gCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGAc < 1:4360799/71‑1 (MQ=255) aGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAt < 1:2965154/71‑1 (MQ=255) aGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAt > 1:3706255/1‑71 (MQ=255) aGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAt < 1:1191283/71‑1 (MQ=255) gTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATc < 1:1604204/71‑1 (MQ=255) aaTATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:147099/1‑60 (MQ=255) atatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccc < 1:2032173/70‑1 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg < 1:2600169/70‑1 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:2786804/1‑70 (MQ=255) aGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcgc > 1:1158533/1‑71 (MQ=255) aGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcgc > 1:4379944/1‑71 (MQ=255) aGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcgc > 1:1710112/1‑71 (MQ=255) gCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1535328/1‑60 (MQ=255) ggCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:85995/1‑63 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:1947594/1‑70 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:1076289/70‑1 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGGCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:567659/70‑1 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:4045734/1‑54 (MQ=255) cTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATg < 1:2128282/71‑1 (MQ=255) tGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCtt > 1:628263/1‑56 (MQ=255) tGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:375541/1‑71 (MQ=255) tccGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:4313289/2‑70 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAtt < 1:3701543/51‑2 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATc < 1:4604664/51‑1 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:3312053/1‑70 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:2189814/1‑70 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:674354/1‑70 (MQ=255) ccGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCgg < 1:4485849/70‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:147866/53‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:246147/66‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:3817200/66‑1 (MQ=255) aCAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:1751501/1‑70 (MQ=255) cAGATGCCCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:2111371/1‑69 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:4619201/1‑36 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:1536801/1‑36 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:393438/1‑69 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:344844/1‑69 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:71871/1‑63 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:3944068/71‑1 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:1068336/71‑1 (MQ=255) aGATGACCAGGGTGTCGATAAAAACGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg > 1:3582686/1‑63 (MQ=255) tGACCAGGGTGTCGATAAAAATGCGAATCATCTGGACAATCCCTTGCGCTGCAGGATGCGGAGGc > 1:1094829/1‑65 (MQ=255) gACCAGGGTGTCGATAAAAATGCCAATCATCTGGa > 1:4049187/1‑35 (MQ=255) gACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccc < 1:302760/42‑1 (MQ=255) ccAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgcc > 1:3055110/1‑71 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:2347903/45‑1 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:1018587/45‑1 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAg < 1:2573224/52‑1 (MQ=255) cGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct > 1:588742/1‑71 (MQ=255) cGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct > 1:3429646/1‑71 (MQ=255) cGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct > 1:2380032/1‑71 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGa > 1:3296067/1‑49 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc < 1:1337976/53‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:4638145/55‑1 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaat > 1:1941156‑M1/3‑18 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa < 1:3995720‑M1/68‑53 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatga < 1:247246‑M1/43‑28 (MQ=255) aTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:1392926/40‑1 (MQ=255) aTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg > 1:2396359/1‑54 (MQ=255) aTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGAGGAGGCCAGGACGccgctgccgctg > 1:210948/1‑70 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:3074123‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:4324625‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattg > 1:3649692‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgactt > 1:53357‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:2730282/1‑40 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:225649/1‑40 (MQ=255) aaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCa > 1:4785461/1‑50 (MQ=255) aaaaTGCCAATAATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctga > 1:4072945/1‑61 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatgaa > 1:2591786‑M1/1‑14 (MQ=255) aaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaaga > 1:795856‑M1/1‑13 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGa > 1:2451271/1‑51 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGa > 1:3426868/1‑51 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGt < 1:2495552/71‑1 (MQ=255) aTGCCAATCATCgattcttcctgagggaacgacttatgaaa > 1:1903718‑M1/1‑12 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgc < 1:196709/53‑1 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:3362001‑M1/65‑55 (MQ=255) ccAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTg < 1:1749108/70‑1 (MQ=255) cAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattg < 1:4751017‑M1/52‑45 (MQ=255) cAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc < 1:1794261/41‑1 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:1086908‑M1/61‑55 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgtt > 1:1931533‑M1/1‑7 (MQ=255) aaTCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc < 1:3852340/40‑1 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta < 1:2742563‑M1/62‑57 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaacta < 1:1551666‑M1/38‑33 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta > 1:4768276‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta > 1:1532848‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagacca < 1:977453‑M1/44‑40 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:2105203‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:2165853‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:3397525‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:2406658‑M1/1‑3 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:4532721/1‑58 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg > 1:2697095/1‑70 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaagg < 1:3244596‑M1/71‑70 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:3462103‑M1/56‑55 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccaca < 1:345760‑M1/43‑42 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaagaccaca < 1:3436114‑M1/43‑42 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaa < 1:765378‑M1/36‑35 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:1623256‑M1/1‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccacattgt > 1:2768619‑M1/1‑1 (MQ=255) | GCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAA > W3110S.gb/6998‑7132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |