| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 50 (1.840) | 33/98 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGT > W3110S.gb/315639‑315775 | cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:2341111/71‑1 (MQ=32) cAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa > 1:2184875/1‑69 (MQ=33) cAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGt < 1:896688/71‑1 (MQ=255) gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGt > 1:658116/1‑71 (MQ=255) aGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGTGTCGTTg < 1:641528/63‑1 (MQ=255) cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa > 1:554958/1‑39 (MQ=37) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc < 1:1600581/68‑1 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCAc < 1:1194650/57‑1 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGt > 1:1316753/1‑70 (MQ=255) aGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:2070715/1‑61 (MQ=255) tttgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCtt < 1:1112784/53‑1 (MQ=255) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:1300780/45‑1 (MQ=255) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:859109/45‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:2307357/69‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:306446/69‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt < 1:927257/52‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:769892/1‑71 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc > 1:2600586/1‑42 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCtt > 1:2608681/1‑49 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc < 1:99091/52‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGc < 1:77219/52‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:2440940/67‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg > 1:1921120/1‑36 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCtt < 1:2617832/45‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcac > 1:189786/1‑66 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa > 1:465713/1‑38 (MQ=255) tAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGc > 1:91264/1‑70 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCatat > 1:1646925/1‑52 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:109230/1‑49 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1939930/1‑49 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:421434/1‑57 (MQ=255) aGGATCATAAAGTCCTCGGGTCGTTGTACACTCTTTTGGCATGTCAGCATATTcaca > 1:2360323/1‑57 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:2033049/47‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa < 1:2252077/47‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:2500209/1‑54 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTa > 1:984981/1‑61 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:1429492/38‑1 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:2551665/1‑45 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGt > 1:1039505/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCaaa < 1:1767714/67‑1 (MQ=255) aTAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGt > 1:1402895/1‑38 (MQ=255) | CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGT > W3110S.gb/315639‑315775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |