| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2855747 | 27 (1.420) | 15 (0.800) | 6/100 | NT | 40.3% | intergenic (‑285/‑2) | ygbA/mutS | hypothetical protein/methyl‑directed mismatch repair protein |
| ? | W3110S.gb | 4124505 = | 18 (0.970) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
CTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAG > W3110S.gb/2855680‑2855817 | cTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt < 1:694493/71‑1 (MQ=255)cTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt < 1:1542766/71‑1 (MQ=255) aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATg > 1:393028/1‑69 (MQ=255) aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAg > 1:996929/1‑71 (MQ=255) aTGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAg > 1:288238/1‑71 (MQ=255) tgATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGt > 1:1294966/1‑69 (MQ=255) tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:1070050/1‑69 (MQ=255) tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:538337/1‑69 (MQ=255) tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:445778/1‑69 (MQ=255) tACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:1654048/1‑69 (MQ=255) aCAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:1345195/1‑68 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:849029/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:1439213/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:645186/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:1794593/71‑1 (MQ=255) aaTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc < 1:1646539/71‑1 (MQ=255) cATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca < 1:305755/70‑1 (MQ=255) aatTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc > 1:1344135‑M1/2‑30 (MQ=255) aatTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc > 1:153931‑M1/2‑30 (MQ=255) aatTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggggg > 1:1044624‑M1/2‑30 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcag > 1:1361272‑M1/1‑29 (MQ=255) aTTTAATATCAGTAAACAGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag > 1:1100104‑M1/1‑29 (MQ=255) ttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagta > 1:1313994‑M1/1‑27 (MQ=255) ttAATATCAGGGAACCGGACATAAGCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:891181/1‑57 (MQ=255) ttAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:230176/1‑57 (MQ=255) ttAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca > 1:549905/1‑57 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:681159/1‑50 (MQ=255) tAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgatg > 1:780951/1‑69 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccata > 1:1815169/1‑57 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccata > 1:685067/1‑57 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccata > 1:1154887/1‑57 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgcag > 1:620312/1‑71 (MQ=255) aaTATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATgcag > 1:119299/1‑71 (MQ=255) tatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttga < 1:1321590‑M1/48‑26 (MQ=255) tatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttga < 1:489123‑M1/48‑26 (MQ=255) tatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttga < 1:319097‑M1/48‑26 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttga > 1:319920‑M1/1‑15 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttga > 1:395693‑M1/1‑15 (MQ=255) cGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggtgcaagtatcccctgcttgatga < 1:1404397‑M1/71‑60 (MQ=255) cGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatga < 1:1219371‑M1/71‑60 (MQ=255) cGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatga < 1:829315‑M1/71‑60 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgc > 1:1270709/1‑46 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgata > 1:8619‑M1/1‑10 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:1451400/52‑1 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:1479272/52‑1 (MQ=255) aCCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaac > 1:671217‑M1/1‑4 (MQ=255) aCCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaac > 1:84970‑M1/1‑4 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaacggc < 1:341315‑M1/71‑71 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgat > 1:914398‑M1/1‑1 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatccactgcttgatga > 1:917673‑M1/1‑1 (MQ=255) | CTTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAG > W3110S.gb/2855680‑2855817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |