Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	406479	459324	52846	4 [0]	[0] 39	aroM–[lon]	aroM,yaiE,ykiA,rdgC,mak,araJ,sbcC,sbcD,phoB,phoR,brnQ,proY,malZ,yajB,queA,tgt,yajC,secD,secF,yajD,tsx,yajI,ybaD,ribD,ribE,nusB,thiL,pgpA,yajO,dxs,ispA,xseB,thiI,yajL,panE,yajQ,yajR,cyoE,cyoD,cyoC,cyoB,cyoA,ampG,yajG,bolA,tig,clpP,clpX,[lon]

AGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATA  >  W3110S.gb/406436‑406478                                           | aGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaata  <  1:20590/43‑1 (MQ=255) aGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaata  <  1:42378/43‑1 (MQ=255) aGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaata  <  1:43518/43‑1 (MQ=255)  gggATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaata  <  1:50857/42‑1 (MQ=255)                                           | AGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATA  >  W3110S.gb/406436‑406478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑