Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	406479	459324	52846	4 [0]	[0] 39	aroM–[lon]	aroM,yaiE,ykiA,rdgC,mak,araJ,sbcC,sbcD,phoB,phoR,brnQ,proY,malZ,yajB,queA,tgt,yajC,secD,secF,yajD,tsx,yajI,ybaD,ribD,ribE,nusB,thiL,pgpA,yajO,dxs,ispA,xseB,thiI,yajL,panE,yajQ,yajR,cyoE,cyoD,cyoC,cyoB,cyoA,ampG,yajG,bolA,tig,clpP,clpX,[lon]

AACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATC  >  W3110S.gb/459325‑459386 |                                                              aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAACCCCGCTGTTCCTGCTCGATGAGATc  >  1:14947/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGAt   >  1:1806/1‑61 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:44791/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:36310/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:38396/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:39828/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:40598/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:40853/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:42336/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:42414/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:42847/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:43081/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:44300/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:34067/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:45348/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:49765/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:5103/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:7334/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:8417/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:8507/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:851/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:19470/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:11494/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:11600/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:12636/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:16532/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:16618/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:17440/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:18576/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:34641/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:20505/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:21267/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:2413/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:26865/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:30778/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:31417/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:32687/1‑62 (MQ=255) aaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:10646/1‑62 (MQ=255) aaCTGATCCAGAAAATGGAGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATc  >  1:12107/1‑62 (MQ=255) |                                                              AACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATC  >  W3110S.gb/459325‑459386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑