| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2401919 | 22 (0.570) | 4 (0.130) +GGCATTTCA |
3/82 | NT | 10.1% | coding (194/978 nt) | nuoH | NADH:ubiquinone oxidoreductase, membrane subunit H |
| ? | W3110S.gb | = 2562879 | 65 (1.690) | coding (1247/1362 nt) | eutB | ethanolamine ammonia‑lyase, large subunit, heavy chain | |||||
ATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAA > W3110S.gb/2401850‑2401986 | atcGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGAt < 1:671885/71‑1 (MQ=255) aaaGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATg < 1:351824/61‑1 (MQ=255) gATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCt > 1:253672/1‑71 (MQ=255) aTGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTg > 1:543741/1‑71 (MQ=255) tGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGAt < 1:597825/52‑1 (MQ=255) cgcgATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGc > 1:134376/1‑71 (MQ=255) gcgATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCg < 1:3592412/71‑1 (MQ=255) gATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGa < 1:3381687/70‑1 (MQ=255) tCCGAGAATTTCGGGATCAAGTCTTCTTTAAAGAACATTTTGATCATGTCCGAAACCAGCTGGAGCGAAcc < 1:2914239/71‑1 (MQ=255) ccGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAAcc > 1:1396872/1‑56 (MQ=255) ccGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCg > 1:562222/1‑71 (MQ=255) cGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGc < 1:3177008/71‑1 (MQ=255) agaATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGAt > 1:2321128/1‑40 (MQ=255) agaATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGAt > 1:318352/1‑40 (MQ=255) tttCGGGATCCAGTCTTCTTTAAAGAACATTTTGAt < 1:1413132/36‑1 (MQ=255) tttCGGGATCCAGTCTTCTTTAAAGAACATTTTGATc > 1:82154/1‑37 (MQ=255) gggATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAg > 1:1298337/1‑66 (MQ=255) gggATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCaa < 1:1992289/70‑1 (MQ=255) tCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAg > 1:2617168/1‑49 (MQ=255) cAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGtt < 1:2139470/71‑1 (MQ=255) gTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCaa < 1:228223/62‑1 (MQ=255) tcttctTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGt < 1:961123/67‑1 (MQ=255) ttcttTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCaa < 1:2951058/59‑1 (MQ=255) tcttTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAacac < 1:2543691/61‑1 (MQ=255) tcttTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAacac < 1:1407487/61‑1 (MQ=255) tcttTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAg < 1:1026566/67‑1 (MQ=255) tAAAGAACATTTTGAggcatttcagtcagttactcaa < 1:3455652‑M1/37‑23 (MQ=255) tAAAGAACATTTTGAggcatttcagtcagttactca < 1:3460656‑M1/36‑22 (MQ=255) tAAAGAACATTTTGAggcatttcagtcagttactca < 1:2987334‑M1/36‑22 (MQ=255) tAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGt < 1:651543/69‑1 (MQ=255) aaaGAACATTTTGAggcatttcagtcagttactcaa > 1:2369496‑M1/1‑14 (MQ=255) cATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCt > 1:1490062/1‑71 (MQ=255) cATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCt > 1:1202063/1‑71 (MQ=255) tttGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTaa > 1:379202/1‑61 (MQ=255) ttGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGaa > 1:3243883/1‑71 (MQ=255) | ATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTGATCATGTCCGCAACCAGCTGGAGCGAACCGCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAA > W3110S.gb/2401850‑2401986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |