| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 809099 | 32 (0.590) | 4 (0.100) +GAATGTGAATAA |
4/76 | NT | 13.1% | coding (581/1290 nt) | bioA | 7,8‑diaminopelargonic acid synthase, PLP‑dependent |
| ? | W3110S.gb | 2239936 = | 38 (0.700) | intergenic (+102/+141) | yeiA/mglC | predicted oxidoreductase/methyl‑galactoside transporter subunit | |||||
CGCCCTGGACAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTGCGGGGCGGGAGCAAACAGGTTTTC > W3110S.gb/809031‑809169 | cgcCCTGGACAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAg > 1:1460448/1‑71 (MQ=255) tGGACAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCccac > 1:681257/1‑71 (MQ=255) tGGACAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCccac > 1:3316723/1‑71 (MQ=255) aCAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCat < 1:2744073/71‑1 (MQ=255) ggCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATcgcg < 1:4483230/71‑1 (MQ=255) ggCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATcgcg < 1:3148169/71‑1 (MQ=255) ggCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATcgcg > 1:2486769/1‑71 (MQ=255) tCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCccac < 1:3911374/59‑1 (MQ=255) tCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCccac < 1:2543066/59‑1 (MQ=255) gATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCaaa > 1:1469865/1‑48 (MQ=255) aTCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCaa > 1:3034084/1‑46 (MQ=255) aTCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCa < 1:797500/71‑1 (MQ=255) aTCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCa < 1:3259804/71‑1 (MQ=255) tCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCAt < 1:2073976/71‑1 (MQ=255) cACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCAtt > 1:3595109/1‑71 (MQ=255) aCCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTc < 1:1074193/71‑1 (MQ=255) gcgATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatc < 1:2480923/71‑1 (MQ=255) gcgATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatc < 1:2915142/71‑1 (MQ=255) gcgATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatc < 1:1079804/71‑1 (MQ=255) ttCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCTCGCTCATCCCATTCGCCATCCATGc > 1:1928713/1‑71 (MQ=255) tCATGACGATGCGCCGCCATCAGGCGTGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGc < 1:3045219/70‑1 (MQ=255) gACGATGCGCCGCCATCAGGCGGGCAAAGCccacc < 1:3898672/35‑1 (MQ=255) aCGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCtt < 1:277547/70‑1 (MQ=255) cGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTg > 1:54531/1‑71 (MQ=255) cGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTg < 1:1256153/71‑1 (MQ=255) tGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTgcgg < 1:1417420/71‑1 (MQ=255) gcgcCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTgcggg > 1:4195166/1‑71 (MQ=255) ccATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTgcggggcgg > 1:2371556/1‑69 (MQ=255) cATCAGGCGGGCAAgaatgtgaataaaggccggataaaa > 1:1084282‑M1/1‑14 (MQ=255) aTCAGGCGGGCAAgaatgtgaataaaggccggataaaac < 1:3390582‑M1/39‑27 (MQ=255) aTCAGGCGGGCAAgaatgtgaataaaggccggataaaa > 1:1906480‑M1/1‑13 (MQ=255) tCAGGCGGGCAAgaatgtgaataaaggccggataa < 1:891367‑M1/35‑24 (MQ=255) tCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTGCGGGGCGGGAGCa < 1:978429/71‑1 (MQ=255) cAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATACATGCGGCtt > 1:3330100/1‑55 (MQ=255) aGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTgcgg > 1:4559040/1‑59 (MQ=255) gCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatccat < 1:3774097/45‑1 (MQ=255) gCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatccat < 1:4340852/45‑1 (MQ=255) gCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGccatccat < 1:2014745/45‑1 (MQ=255) gCGGGCAAAGCCCACCATATCGCACTCATCCCATTCGccatccat < 1:4407371/45‑1 (MQ=255) aaGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTGCGGGGCGGGAGCAAACAGGTTTTc < 1:1162808/71‑1 (MQ=255) | CGCCCTGGACAATCGGCTCAATGATCACCGCCGCGATTTCATGACGATGCGCCGCCATCAGGCGGGCAAAGCCCACCATATCGCGCTCATCCCATTCGCCATCCATGCGGCTTTGCGGGGCGGGAGCAAACAGGTTTTC > W3110S.gb/809031‑809169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |