| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 809099 | 32 (0.590) | 4 (0.100) +GAATGTGAATAA |
4/76 | NT | 13.1% | coding (581/1290 nt) | bioA | 7,8‑diaminopelargonic acid synthase, PLP‑dependent |
| ? | W3110S.gb | 2239936 = | 38 (0.700) | intergenic (+102/+141) | yeiA/mglC | predicted oxidoreductase/methyl‑galactoside transporter subunit | |||||
CGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAA > W3110S.gb/2239867‑2240000 | cGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAg > 1:3379976/1‑71 (MQ=255) ggATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCg > 1:2506946/1‑71 (MQ=255) gATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCgg < 1:4692371/71‑1 (MQ=255) tGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGa > 1:1201547/1‑70 (MQ=255) cGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaa < 1:5041379/71‑1 (MQ=255) cTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaaa > 1:1688423/1‑70 (MQ=255) ttGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAc > 1:1908141/1‑70 (MQ=255) cTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCg < 1:4684775/71‑1 (MQ=255) tATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGACAGCGtt > 1:4884596/1‑71 (MQ=255) aTCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAgg > 1:977149/1‑48 (MQ=255) aTCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg > 1:3702619/1‑71 (MQ=255) aTCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg > 1:5188055/1‑71 (MQ=255) tCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTg > 1:4573836/1‑70 (MQ=255) cGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa < 1:4946759/70‑1 (MQ=255) cGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCAt > 1:3191464/1‑71 (MQ=255) tACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGc < 1:3530386/59‑1 (MQ=255) aCAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaaa > 1:4458585/1‑49 (MQ=255) aCAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCAt < 1:4047222/65‑1 (MQ=255) aCAAAACCATACAAATCAGTATGTTGAGATTATTGTAGGCCGGATaaaa > 1:4947795/1‑49 (MQ=255) aaaaCCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAAcgc < 1:3159237/50‑1 (MQ=255) aaaCCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCAttt < 1:3060553/71‑1 (MQ=255) aCCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaaa > 1:2689908/1‑44 (MQ=255) aCCATACAAATCAGTAAGTTGAGCTTATTGTAGTCCGGATaaaa > 1:3263584/1‑44 (MQ=38) tACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATa < 1:3916635/37‑1 (MQ=255) catcaggcgggcaagaatgtgaataaAGGCCGGATaaaa > 1:1084282‑M2/27‑39 (MQ=255) aCAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaaa > 1:4593917/1‑39 (MQ=255) aCAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa < 1:289284/54‑1 (MQ=255) cAAATCAGTATGTTGAGCTTATTGTAGGCCGGATaaaa > 1:2914525/1‑38 (MQ=255) atcaggcgggcaagaatgtgaataaAGGCCGGATaaaa > 1:1906480‑M2/26‑38 (MQ=255) atcaggcgggcaagaatgtgaataaAGGCCGGATAAAAc < 1:3390582‑M2/14‑1 (MQ=255) tcaggcgggcaagaatgtgaataaAGGCCGGATaa < 1:891367‑M2/11‑1 (MQ=255) aaaTCAGTATGTTGAGCTTATTGTAGGCCGGATaa < 1:1571521/35‑1 (MQ=255) aTCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGc < 1:1103686/56‑1 (MQ=255) aGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGt > 1:1703682/1‑43 (MQ=255) aTGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGc < 1:329717/38‑1 (MQ=255) aTGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCa > 1:362373/1‑44 (MQ=255) tGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGt < 1:1655246/62‑1 (MQ=255) tGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATg < 1:3911886/71‑1 (MQ=255) ttGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcg > 1:2362024/1‑71 (MQ=255) gAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggc > 1:3081421/1‑71 (MQ=255) cTTATTGTTGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCg < 1:138607/60‑1 (MQ=255) ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGt < 1:1315988/69‑1 (MQ=255) ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTg < 1:2606486/70‑1 (MQ=255) tATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATgcggcg > 1:4123599/1‑67 (MQ=255) aTTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGaa < 1:444981/70‑1 (MQ=255) aTTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGa < 1:4240987/69‑1 (MQ=255) | CGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATGTTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAA > W3110S.gb/2239867‑2240000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |