| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 97 (1.660) | 24/100 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
Only 100 of 113 total aligned reads displayed.
CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTT > W3110S.gb/315639‑315776 | cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:3215119/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:3142610/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:4209901/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:2582013/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:4762396/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:4459955/71‑1 (MQ=32) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt < 1:4007216/63‑1 (MQ=255) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt < 1:713005/63‑1 (MQ=255) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt < 1:1684802/63‑1 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg > 1:2059920/1‑71 (MQ=255) tGAAAAAAAAAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg > 1:721023/1‑71 (MQ=255) gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTc > 1:5294284/1‑66 (MQ=255) gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTc > 1:4894179/1‑66 (MQ=255) aaaCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTcc < 1:5400191/71‑1 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTc > 1:4742177/1‑46 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:4355935/1‑65 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:4613259/1‑65 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:4520805/1‑65 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:5193782/1‑65 (MQ=255) aGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGt > 1:2452008/1‑69 (MQ=255) gCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:2154199/71‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:2029924/47‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:1604264/47‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:2159788/47‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:4473993/47‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:463297/47‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:48434/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:2776137/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:333973/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:2320183/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:1384944/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:5405105/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:1400188/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:640245/68‑1 (MQ=255) gtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata < 1:3735587/68‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:3211109/71‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGGTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:4188842/71‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:3456194/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:1091312/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:4098412/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:1656405/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:1460138/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTc < 1:1196208/42‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcac > 1:2558696/1‑70 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa > 1:1954580/1‑42 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa > 1:3677830/1‑42 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa > 1:3792550/1‑42 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTACa > 1:3200058/1‑42 (MQ=255) tatTACGTAGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa > 1:1774406/1‑42 (MQ=255) ttAGGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:808842/1‑71 (MQ=255) ttACGTGGGTAGGATCATACAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:3997651/49‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2918049/49‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:4288958/49‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:745469/49‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:4715842/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:1144011/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:2103790/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:1764732/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAc > 1:5316091/1‑70 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAc > 1:4512002/1‑70 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTGGGCATGTCAGCATATTCACATAcc > 1:5432927/1‑71 (MQ=255) tGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:4308985/58‑1 (MQ=255) tGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:180712/58‑1 (MQ=255) tGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:5235153/58‑1 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAg > 1:4656139/1‑71 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCAACTCTTTTGGCATg > 1:3629926/1‑46 (MQ=255) gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2192494/41‑1 (MQ=255) gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:3520014/41‑1 (MQ=255) gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:5012511/41‑1 (MQ=255) gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:5165031/41‑1 (MQ=255) tAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:606038/40‑1 (MQ=255) ggATCATAAAGTCCTCGGGTCGCTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCaaa < 1:4967378/71‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:2234052/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:1980989/37‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:3451089/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:5501535/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:3750230/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:3795162/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:5627/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:1255291/41‑1 (MQ=255) gATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg < 1:1225689/41‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:5107441/36‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:119301/54‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:1310379/54‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:784872/54‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:3353833/54‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:4244070/54‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca < 1:382729/54‑1 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGt < 1:200555/71‑1 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGt > 1:3849010/1‑71 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACGCTTTTGGCATGTCAGCATATTcac > 1:3018470/1‑52 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTc > 1:3881558/1‑49 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:5269676/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:2293543/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:3191415/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:4222629/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:3828936/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:406858/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGtt > 1:3946879/1‑71 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAACGTACCAGCAAAAGtt > 1:333532/1‑71 (MQ=255) | CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAAAAGTT > W3110S.gb/315639‑315776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |