| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 97 (1.660) | 24/100 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
Only 100 of 191 total aligned reads displayed.
CATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATG > W3110S.gb/576843‑576981 | tcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaAc < 1:4216413‑M2/2‑1 (MQ=255)tcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACt > 1:33034‑M2/69‑71 (MQ=255)catcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACt > 1:896093/1‑71 (MQ=255)catcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACt > 1:4481691/1‑71 (MQ=255) cagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTg > 1:4804936‑M2/68‑71 (MQ=255) tcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtg > 1:2990206‑M2/1‑69 (MQ=255) tcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtg > 1:4311221‑M2/1‑69 (MQ=255) tcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtg > 1:2039403‑M2/1‑69 (MQ=255) tcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtg > 1:3894335‑M2/1‑69 (MQ=255) tcatTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAG‑AATTGCTATAGCATCAGTGTTAATCACTtga > 1:4104840‑M2/1‑68 (MQ=255) atTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgat < 1:3206643‑M2/71‑5 (MQ=255) atTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtga > 1:3607539‑M2/1‑67 (MQ=255) atTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtga > 1:1652320‑M2/1‑67 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:4961974‑M2/63‑70 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:2267420‑M2/63‑70 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:1685699‑M2/63‑70 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc < 1:2582519‑M2/8‑1 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:4460007‑M2/63‑70 (MQ=255) cggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGccc > 1:2874094‑M2/63‑70 (MQ=255) aCGAAAAGCCGTTGCTGCTGCTATTGGTGGCGTAGCAATTGCTATAGCATCAGTGTTAATCACTtgatct < 1:251844‑M2/70‑7 (MQ=255) cGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatctta < 1:1673916‑M2/71‑9 (MQ=255) acaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTg > 1:188471‑M2/59‑71 (MQ=255) acaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTg > 1:170991‑M2/59‑71 (MQ=255) acaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTg > 1:4783044‑M2/59‑71 (MQ=255) atttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGt > 1:441696‑M2/56‑70 (MQ=255) atttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGt > 1:4634369‑M2/56‑70 (MQ=255) atttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGt < 1:5526882‑M2/15‑1 (MQ=255) gCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagc > 1:909822‑M2/1‑57 (MQ=255) tgctgctgcTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatag < 1:5317392‑M2/71‑20 (MQ=255) gctgctgctATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagt < 1:3468736‑M2/71‑21 (MQ=255) aagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCt > 1:4399535‑M2/46‑71 (MQ=255) ctgctATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatctt > 1:2334570‑M2/1‑47 (MQ=255) gaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTg > 1:5488409‑M2/44‑70 (MQ=255) cctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAg < 1:2485010‑M2/31‑1 (MQ=255) aTTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcg < 1:3247535‑M2/71‑30 (MQ=255) tcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAgg > 1:678211‑M2/39‑70 (MQ=255) tcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGgt > 1:949493‑M2/39‑71 (MQ=255) tcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCAGGAAGgt > 1:1565320‑M2/39‑71 (MQ=255) cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTaa > 1:384470‑M2/38‑54 (MQ=255) gcttaggcctgtgtccatattacgtgggtaggatcaACTGGCTCAAGTGGTAACGATGGTCTGGAAGgtg < 1:3544941‑M2/34‑1 (MQ=255) gcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGgtgt > 1:3819290‑M2/37‑71 (MQ=255) gcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGgtg < 1:120704‑M2/34‑1 (MQ=255) cttaggcctgtgtccatattacgtgggtaggatcaa < 1:3072829‑M2/1‑1 (MQ=255) cttaggcctgtgtccatattacgtgggtaggatcaa < 1:1021279‑M2/1‑1 (MQ=255) cttaggcctgtgtccatattacgtgggtaggatcaa < 1:1519638‑M2/1‑1 (MQ=255) cttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTc < 1:3418734‑M2/36‑1 (MQ=255) gCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggct < 1:3721489‑M2/67‑33 (MQ=255) gCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggct < 1:3883356‑M2/67‑33 (MQ=255) cGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggct > 1:2753463‑M2/1‑34 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaat > 1:1034702‑M2/1‑33 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaat > 1:3799955‑M2/1‑33 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaat > 1:3719057‑M2/1‑33 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatctta < 1:881291‑M2/41‑9 (MQ=255) ggAGCAATTGCTATAGCATCAGTGTTAATCACTtgatctta < 1:3573078‑M2/41‑9 (MQ=255) gAGCAATTGCTATAGCATCAGTGTTAATCACTtgat > 1:5054348‑M2/1‑32 (MQ=255) gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:1717667‑M2/1‑30 (MQ=255) gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:3020389‑M2/1‑30 (MQ=255) gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagta > 1:5571712‑M2/1‑30 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATg > 1:2509510‑M2/25‑46 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATg > 1:1768945‑M2/25‑46 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:1424997‑M2/25‑54 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:594250‑M2/25‑54 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:3044601‑M2/25‑54 (MQ=255) gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGaa > 1:3551384‑M2/25‑54 (MQ=255) catattacgtgggtaggatcaACTGGCCTAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcataccata > 1:1192583‑M2/22‑71 (MQ=255) catattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCt > 1:874826‑M2/22‑61 (MQ=255) catattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa > 1:48924‑M2/22‑62 (MQ=255) catattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa > 1:705592‑M2/22‑62 (MQ=255) tattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGgtgt < 1:1332865‑M2/35‑1 (MQ=255) tattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCt < 1:858819‑M2/40‑1 (MQ=255) attacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa < 1:3648089‑M2/41‑1 (MQ=255) attacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTa < 1:2004136‑M2/41‑1 (MQ=255) ttacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcatac < 1:922262‑M2/46‑1 (MQ=255) ttacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcatac < 1:1584813‑M2/46‑1 (MQ=255) tCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag > 1:4077946‑M2/1‑15 (MQ=255) tCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag > 1:1315547‑M2/1‑15 (MQ=255) tCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag > 1:4179304‑M2/1‑15 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:5160959‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:5118930‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:2395070‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:2084408‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:1823553‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttg < 1:3939920‑M2/61‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt < 1:1373707‑M2/60‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt < 1:2307138‑M2/60‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt < 1:4665905‑M2/60‑1 (MQ=255) ggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt < 1:1990101‑M2/60‑1 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:3977361‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:3118883‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:1074398‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:810346‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:671826‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:1233098‑M2/1‑12 (MQ=255) gtgtTAATCACTtgatcttacccagcaatagtgga > 1:5490268‑M2/1‑12 (MQ=255) taggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgtt > 1:2158739‑M2/9‑71 (MQ=255) taggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgtt > 1:4877456‑M2/9‑71 (MQ=255) taggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAttgt > 1:3135609‑M2/9‑70 (MQ=255) tcaACTGGCCCAAGTGTTAACGATGGTCTGGAAGGTGTCAGCTAcatac < 1:2658042‑M2/46‑1 (MQ=255) tCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaca > 1:1998854‑M2/1‑5 (MQ=255) aCTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATg < 1:2814208/71‑1 (MQ=255) | CATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATG > W3110S.gb/576843‑576981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |