| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1015094 | 58 (0.840) | 8 (0.120) | 3/98 | NT | 13.6% | coding (975/1647 nt) | fumA | aerobic Class I fumarate hydratase |
| ? | minE | = 1015113 | 47 (0.720) | coding (956/1647 nt) | fumA | aerobic Class I fumarate hydratase | |||||
CCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGG > minE/1015027‑1015163 | ccGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCttt < 1:2514603/70‑1 (MQ=255) cGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGa < 1:3855853/71‑1 (MQ=255) gATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGatat < 1:1222693/71‑1 (MQ=255) gATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGatat < 1:1227433/71‑1 (MQ=255) gATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGatat < 1:952021/71‑1 (MQ=255) gATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCT < 1:2394566‑M1/64‑1 (MQ=255) tatatTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGata > 1:3597975/1‑68 (MQ=255) atatTTGCCTAGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTAc > 1:3132106/1‑71 (MQ=255) tatTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACg > 1:2179495/1‑71 (MQ=255) tatTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACg > 1:1080308/1‑71 (MQ=255) tttGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTa > 1:2346464/1‑67 (MQ=255) tttGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGt > 1:3887570/1‑71 (MQ=255) cTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTcagca < 1:3801385/71‑1 (MQ=255) cTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTcag > 1:1118843/1‑69 (MQ=255) cTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTcag > 1:2482628/1‑69 (MQ=255) tGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTcag > 1:1412575/1‑68 (MQ=255) ggATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGata < 1:1185891/57‑1 (MQ=255) ggATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGata < 1:324744/57‑1 (MQ=255) gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2210042‑M2/1‑69 (MQ=255) gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag < 1:1467273‑M2/71‑3 (MQ=255) gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2975916‑M2/1‑69 (MQ=255) gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2141771‑M2/1‑69 (MQ=255) gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag < 1:3906457‑M2/71‑3 (MQ=255) ttATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagca < 1:415211/71‑1 (MQ=255) ttATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGagc > 1:136886‑M2/1‑67 (MQ=255) aTGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3748111/1‑70 (MQ=255) aTGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag < 1:2763108/70‑1 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:1591275/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3572368/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3470168/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGga < 1:2696994/71‑1 (MQ=255) ttCCAGTTTTTCGATCCAGATCGCCTGACGGTTGATCTTCGCTTTGat > 1:3425777/1‑48 (MQ=255) ttCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaa < 1:3864837‑M1/56‑14 (MQ=255) ttCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGat > 1:2780378/1‑48 (MQ=255) ccAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGata > 1:3254159/1‑47 (MQ=255) ccAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACg > 1:1195737/1‑71 (MQ=255) ccAGTTTTTCGATCCAGATCCCCTGAAGGTTGATCTTCGCTctgctgaccgtaata > 1:2940006‑M1/1‑41 (MQ=255) ccAGTTATTCGATCCAGATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaata > 1:532971‑M1/1‑41 (MQ=255) aGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGata > 1:4011891/1‑45 (MQ=255) aGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTcagca < 1:2548421/57‑1 (MQ=255) tttttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCa < 1:2222669/71‑1 (MQ=255) ttttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGga > 1:704258/1‑62 (MQ=255) tttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGa < 1:1698776‑M2/55‑2 (MQ=255) tttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATa > 1:498126/1‑71 (MQ=255) ttCGATCCAGATCCCCTGACTGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGAc < 1:3758986/63‑1 (MQ=255) tCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGatat > 1:715180/1‑40 (MQ=255) cGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATacc < 1:883604/70‑1 (MQ=255) ccAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgaccg > 1:1859066/1‑71 (MQ=255) cAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgaccg > 1:2591789/1‑70 (MQ=255) cAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCgg > 1:1711128/1‑71 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaatatcaaa < 1:3643163‑M1/45‑21 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaatatcaaa < 1:2240749‑M1/45‑21 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaatatcaaa < 1:2801907‑M1/45‑21 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaatatcaaa < 1:2208118‑M1/45‑21 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTctgctgaccgtaatatcaaa < 1:788502‑M1/45‑21 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCggg > 1:3413489/1‑70 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGc < 1:2235485/71‑1 (MQ=255) aTCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:954185‑M2/1‑43 (MQ=255) aTCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCgg < 1:2540150/68‑1 (MQ=255) ccTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATacc < 1:2606005/58‑1 (MQ=255) ccTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGAt < 1:818359/71‑1 (MQ=255) cTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGcc < 1:3798432/51‑1 (MQ=255) gACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg > 1:1646098/1‑71 (MQ=255) gACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg > 1:493329/1‑71 (MQ=255) aCGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcgc < 1:819712/71‑1 (MQ=255) aCGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg < 1:3581500/70‑1 (MQ=255) gTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgacc < 1:1900732/55‑1 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:1906867/1‑70 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:2328276/1‑70 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:177184/1‑70 (MQ=255) tGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa > 1:3876042/1‑71 (MQ=255) tGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa > 1:622791/1‑71 (MQ=255) gATCTTCTCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGTATGCGCCGTGAc > 1:2363512/1‑71 (MQ=255) gATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:2088018/70‑1 (MQ=255) gATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:1180555/70‑1 (MQ=255) aTCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGAc < 1:1341887/70‑1 (MQ=255) aTCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACg > 1:381433/1‑71 (MQ=255) aTCTTCGCTTTGATATTACGGGCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:1537182/69‑1 (MQ=255) tCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGt > 1:489143/1‑71 (MQ=255) cGCTTTTATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACg < 1:1568863/66‑1 (MQ=255) cGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGt < 1:3868229/67‑1 (MQ=255) cGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTgg > 1:3018568/1‑69 (MQ=255) gCTctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataa > 1:136886‑M1/1‑3 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataatc > 1:2141771‑M1/1‑2 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataatc > 1:2975916‑M1/1‑2 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataatc < 1:1467273‑M1/71‑70 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataatc > 1:2210042‑M1/1‑2 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaaaactggaacataatc < 1:3906457‑M1/71‑70 (MQ=255) ctctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggat > 1:954185‑M1/1‑2 (MQ=255) cTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATg > 1:2771121/1‑54 (MQ=255) cTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAgg > 1:3103579/1‑71 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:3643163‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2240749‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:788502‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2801907‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2208118‑M2/45‑26 (MQ=255) tctgctgaccgtaatatcaaagcgaagatcaaccgtcaggggatctggatcgaaa < 1:1698776‑M1/55‑55 (MQ=255) | CCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGG > minE/1015027‑1015163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |