| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1015094 | 58 (0.840) | 8 (0.120) | 3/98 | NT | 13.6% | coding (975/1647 nt) | fumA | aerobic Class I fumarate hydratase |
| ? | minE | = 1015113 | 47 (0.720) | coding (956/1647 nt) | fumA | aerobic Class I fumarate hydratase | |||||
GATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGT > minE/1015045‑1015182 | gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2210042‑M2/1‑69 (MQ=255)gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2141771‑M2/1‑69 (MQ=255)gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag < 1:3906457‑M2/71‑3 (MQ=255)gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag < 1:1467273‑M2/71‑3 (MQ=255)gATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:2975916‑M2/1‑69 (MQ=255) ttATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagca < 1:415211/71‑1 (MQ=255) ttATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGagc > 1:136886‑M2/1‑67 (MQ=255) aTGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag < 1:2763108/70‑1 (MQ=255) aTGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3748111/1‑70 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:1591275/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3572368/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCagcagagcag > 1:3470168/1‑69 (MQ=255) tGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGga < 1:2696994/71‑1 (MQ=255) ccAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACg > 1:1195737/1‑71 (MQ=255) tttttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCa < 1:2222669/71‑1 (MQ=255) ttttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGga > 1:704258/1‑62 (MQ=255) tttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGa < 1:1698776‑M2/55‑2 (MQ=255) tttCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATa > 1:498126/1‑71 (MQ=255) ttCGATCCAGATCCCCTGACTGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGAc < 1:3758986/63‑1 (MQ=255) cGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATacc < 1:883604/70‑1 (MQ=255) ccAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgaccg > 1:1859066/1‑71 (MQ=255) cAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgaccg > 1:2591789/1‑70 (MQ=255) cAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCgg > 1:1711128/1‑71 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCggg > 1:3413489/1‑70 (MQ=255) gATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGc < 1:2235485/71‑1 (MQ=255) aTCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGag > 1:954185‑M2/1‑43 (MQ=255) aTCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCgg < 1:2540150/68‑1 (MQ=255) ccTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATacc < 1:2606005/58‑1 (MQ=255) ccTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGAt < 1:818359/71‑1 (MQ=255) cTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGcc < 1:3798432/51‑1 (MQ=255) gACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg > 1:493329/1‑71 (MQ=255) gACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg > 1:1646098/1‑71 (MQ=255) aCGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcgc < 1:819712/71‑1 (MQ=255) aCGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATgcg < 1:3581500/70‑1 (MQ=255) gTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATaccgacc < 1:1900732/55‑1 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:2328276/1‑70 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:177184/1‑70 (MQ=255) ttGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGt > 1:1906867/1‑70 (MQ=255) tGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa > 1:3876042/1‑71 (MQ=255) tGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa > 1:622791/1‑71 (MQ=255) gATCTTCTCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGTATGCGCCGTGAc > 1:2363512/1‑71 (MQ=255) gATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:2088018/70‑1 (MQ=255) gATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:1180555/70‑1 (MQ=255) aTCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGAc < 1:1341887/70‑1 (MQ=255) aTCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACg > 1:381433/1‑71 (MQ=255) aTCTTCGCTTTGATATTACGGGCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGa < 1:1537182/69‑1 (MQ=255) tCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGt > 1:489143/1‑71 (MQ=255) cGCTTTTATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACg < 1:1568863/66‑1 (MQ=255) cGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGt < 1:3868229/67‑1 (MQ=255) cGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTgg > 1:3018568/1‑69 (MQ=255) cTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATg > 1:2771121/1‑54 (MQ=255) cTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAgg > 1:3103579/1‑71 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:3643163‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:788502‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2801907‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2240749‑M2/45‑26 (MQ=255) tttGATATTACGGTCAGCAGagcgaagatcaaccgtcaggggatc < 1:2208118‑M2/45‑26 (MQ=255) tGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGc < 1:3046070/69‑1 (MQ=255) tGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGc < 1:2622308/69‑1 (MQ=255) tGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGc < 1:4039081/69‑1 (MQ=255) tGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCg < 1:1784858/70‑1 (MQ=255) tatTACGGTCAGCAGagcgaagatcaaccttcaggggatctggatcgaaaaactgg > 1:2940006‑M2/1‑15 (MQ=255) tatTACGGTCAGCAGagcgaagatcaaccgtcaggggatctggatcgaataactgg > 1:532971‑M2/1‑15 (MQ=255) ttACGGTCAGCAGagcgaagatcaaccgtcaggggatctggatcgaaaaactggaa < 1:3864837‑M2/56‑44 (MQ=255) ttACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTg > 1:460905/1‑53 (MQ=255) ttACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAc < 1:1850388/71‑1 (MQ=255) aCGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAcgc > 1:583149/1‑71 (MQ=255) aCGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAcg < 1:2364932/70‑1 (MQ=255) aCGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAcg < 1:669902/70‑1 (MQ=255) aCGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAcg < 1:674587/70‑1 (MQ=255) cGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCAcg < 1:2552259/69‑1 (MQ=255) agcagagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATg < 1:1272660/70‑1 (MQ=255) gcagagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGc < 1:797459/51‑1 (MQ=255) gcagagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGc < 1:1337797/51‑1 (MQ=255) gcagagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCg < 1:2958340/56‑1 (MQ=255) agagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt > 1:2747198/1‑71 (MQ=255) agagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt > 1:3309160/1‑71 (MQ=255) agagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt < 1:1408788/71‑1 (MQ=255) agagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt > 1:318514/1‑71 (MQ=255) agagcagGAGACGCCCATAACGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt > 1:875716/1‑71 (MQ=255) gagcagGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGt > 1:1453616/1‑70 (MQ=255) | GATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTTTGATATTACGGTCAGCAGAGCAGGAGACGCCCATACCGACCGGGCAGGATGCGCCGTGACGTGGCAGGCGAATCACGCGGATGTCGT > minE/1015045‑1015182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |