New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 499542 | 41 (0.680) | 4 (0.090) +GCCTGTGCTTG |
3/76 | NT | 11.4% | coding (702/1473 nt) | modF | fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily |
? | minE | 713558 = | 39 (0.650) | coding (544/561 nt) | yceB | predicted lipoprotein |
TTCAAGCTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/499530‑499542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACAATTTCGCCTG > minE/713558‑713572 ||||||||||| TTCAAGCTGTTCAGCCTGTGCTTGTGACAATTTCGCCTG < 1:1676258/39‑1 TTCAAGCTGTTCAGCCTGTGCTTGTGACAATTTCGCCTG < 1:1980664/39‑1 TTCAAGCTGTTCAGCCTGTGCTTGTGACAATTTCGCC < 1:581826/37‑1 TCAAGCTGTTCAGCCTGTGCTTGTGACAATTTCGC > 1:1798540/1‑35 ||||||||||| TTCAAGCTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/499530‑499542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACAATTTCGCCTG > minE/713558‑713572 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |