| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 499542 | 41 (0.680) | 4 (0.090) +GCCTGTGCTTG |
3/76 | NT | 11.4% | coding (702/1473 nt) | modF | fused subunits of molybdate transporter and ATP‑binding components of ABC superfamily |
| ? | minE | 713558 = | 39 (0.650) | coding (544/561 nt) | yceB | predicted lipoprotein | |||||
GTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTGC > minE/499473‑499612 | gTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCAc < 1:1454313/71‑1 (MQ=255) cGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATgc < 1:3226979/71‑1 (MQ=255) ggTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATgcgc < 1:1043490/71‑1 (MQ=255) gTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGcc < 1:3218774/71‑1 (MQ=255) gTAAGGCGTGACGTGCTGAAGGATCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGcc < 1:3001036/71‑1 (MQ=255) ggCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGtt < 1:3805789/71‑1 (MQ=255) cGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTgc < 1:2002146/71‑1 (MQ=255) tGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTgcgc < 1:3174732/71‑1 (MQ=255) aaGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTg < 1:2409833/69‑1 (MQ=255) aaGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTg < 1:1283273/69‑1 (MQ=255) aaGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGc < 1:3301073/70‑1 (MQ=255) aaGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGc < 1:699020/70‑1 (MQ=255) gTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTgc < 1:3341683/56‑1 (MQ=255) gTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGcgac < 1:475357/61‑1 (MQ=255) tCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCtttttg > 1:3285585/1‑71 (MQ=255) ccggctccggcAGTTGCACACCTTCAAGCTGTTCACTATg > 1:2747266/1‑40 (MQ=255) ccggctccggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGGGACGAGTGCttgttg > 1:3875885/1‑67 (MQ=255) ccggctccggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAg > 1:314617/1‑70 (MQ=255) cggctccggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAg > 1:3003378/1‑69 (MQ=255) ggctccggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGc < 1:1303012/69‑1 (MQ=255) ggctccggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAg < 1:2879395/71‑1 (MQ=255) cggcAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTc < 1:146498/69‑1 (MQ=255) gTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCa < 1:407788/60‑1 (MQ=255) gTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCa < 1:733337/60‑1 (MQ=255) gCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGcgacga > 1:1004835/1‑42 (MQ=255) gCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCttgt > 1:2619460/1‑50 (MQ=255) gCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAg > 1:1837531/1‑58 (MQ=255) acacCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAgcgc > 1:3907920/1‑70 (MQ=255) cacCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAg < 1:353072/66‑1 (MQ=255) acCTTCAAGCTGTTCACTATGCGCCAGTTTCGCGACGAGTGc > 1:1935036/1‑42 (MQ=255) acCTTCAAGCTGTTCACTATGCGCCAGTTGCGcgacg < 1:4136118/37‑1 (MQ=255) acCTTCAAGCTGTTCACTATGCGCCAGTTGCGcgacg < 1:1203760/37‑1 (MQ=255) acCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGa > 1:2038109/1‑50 (MQ=255) acCTACAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGc > 1:2400832/1‑42 (MQ=255) ccTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAg > 1:3661305/1‑53 (MQ=255) ccTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGt < 1:667490/71‑1 (MQ=255) cTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCct < 1:462215/57‑1 (MQ=255) ttCAAGCTGTTCAgcctgtgcttgtgacaatttcgcctg < 1:1980664‑M1/39‑27 (MQ=255) ttCAAGCTGTTCAgcctgtgcttgtgacaatttcgcctg < 1:1676258‑M1/39‑27 (MQ=255) ttCAAGCTGTTCAgcctgtgcttgtgacaatttcgcc < 1:581826‑M1/37‑25 (MQ=255) tCAAGCTGTTCAgcctgtgcttgtgacaatttcgc > 1:1798540‑M1/1‑12 (MQ=255) tCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAg > 1:1955027/1‑50 (MQ=255) tCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTc > 1:1573354/1‑71 (MQ=255) cAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTc > 1:2299702/1‑70 (MQ=255) aaGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCg > 1:2133786/1‑71 (MQ=255) cTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTa < 1:1738956/71‑1 (MQ=255) tGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGc < 1:1767557/42‑1 (MQ=255) gTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAg < 1:3791698/40‑1 (MQ=255) ttCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTaa < 1:196176/69‑1 (MQ=255) ttCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACg < 1:2684957/71‑1 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAg > 1:402697/1‑51 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTc > 1:2608737/1‑61 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGt < 1:3726490/70‑1 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGt < 1:1220258/70‑1 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg > 1:1874057/1‑71 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg > 1:3009039/1‑71 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg > 1:126957/1‑71 (MQ=255) cACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg > 1:2109581/1‑71 (MQ=255) aCTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTc < 1:2920715/42‑1 (MQ=255) aCTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg < 1:1971988/70‑1 (MQ=255) aCTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTg > 1:2291327/1‑70 (MQ=255) aCTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTGc < 1:577835/71‑1 (MQ=255) | GTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTGGAGCAGTTCCTCTTTAGCGCCAGTTTCCGCTAACGTGC > minE/499473‑499612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |